GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-20 09:02:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Arachis hypogaea Ahy.Unigene11033 mRNA sequence.
JR551391.1:221-242
CGCGCGCGCCGGCGACGTTCTTCGGGGAGT221GCACAATGAAGAGAGGTTAGGGGTTCTTCGATCTGATGTTCCTCATCGCGGT
Arachis hypogaea cultivar Shitouqi chromosome A02.
CP030984.1:19163643-19163664
CGCGCTCGCCGGTGACGTTCTTCGTGGAGT19163643GCACAATGAAGAGAGGTTAGGGGTTCTTCGATTTGATGTTCTTCATCGCAGT
Arachis hypogaea cultivar Shitouqi chromosome A06.
CP030988.1:64955285-64955306
CGTGCGCGCCGGCAACATTCTTCGGGGAGT64955285GCACAATGAAGAGAGGTTAGGGGTTCTTCGATCTGATGTTCCTCATCGTAGT
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:132283464-132283485
CACGCGCGCCGGCGACGTTCTTCGCGGAGT132283464GCACAATGAAGAGAGGTTAGGGTTCTTCGATATGATGCTCTTCATCGCGATC
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:132447552-132447573
CACGCGCGCCGGCGACGTTCTTCGCGGAGT132447552GCACAATGAAGAGAGGTTAGGGTTCTTCGATATGATGCTCTTCATCGCGACC
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:4300659-4300680
CACGCGCACCGGCGACGTTCTTCGCGGAGT4300659GCACAATGAAGAGAGGTTAGGGTTCTTCGATATGATGTGCTTCATCACGATT
Arachis hypogaea cultivar Shitouqi chromosome B10.
CP031002.1:57261825-57261846
CGCGCGTGCCGGCGACGTTCTTCGGGGAGT57261825GCACAATGAAGAGAGGTTAGGGGTTCTTCGATCTGATGTTCCTCATCGCGGT
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:91669430-91669451
CACGCGCGCCGACGACGTTCTTCGCGGAGT91669430GCACAATGAAGAGAGGTTAGGGTTCTTTGATATGATGTTCTTCATCGCGATT
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:91687033-91687054
CACGCGCGCCGACGACGTTCTTCGCGGAGT91687033GCACAATGAAGAGAGGTTAGGGTTCTTTGATATGATGTTCTTCATCGCGATT
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:130015137-130015158
CACGCGCGCCGGCGACGTTCTTCGCGGAGT130015137GCACAATGAAGAGAGGTTAGGGTTCTTCGATATGATGCTCTTCATCGCGATC
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:130080434-130080455
CACGCGCGCCGGCGACGTTCTTCGCGGAGT130080434GCACAATGAAGAGAGGTTAGGGTTCTTCGATATGATGCTCTTCATCGCGATC
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:130179384-130179405
CACGCGCGCCGGCGACGTTCTTCGCGGAGT130179384GCACAATGAAGAGAGGTTAGGGTTCTTCGATATGATGCTCTTCATCGCGACC
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:10453428-10453449
CACGCGCACCGGCGACGTTCTTCGCGGAGT10453428GCACAATGAAGAGAGGTTAGGGTTCTTCGATATGATGTGCTTCATCACGATT
Arachis ipaensis cultivar K30076 chromosome 10.
CP049901.1:57461700-57461721
CGCGCGTGCCGGCGACGTTCTTCGGGGAGT57461700GCACAATGAAGAGAGGTTAGGGGTTCTTCGATCTGATGTTCCTCATCGCGGT
Arachis hypogaea clone AH2TC9E08 microsatellite sequence.
DQ099150.1:221-242
CACGCGCGCCGACGACGTTCTTCGCAGAGT221GCACAATGAAGAGAGGTTAGGGTTCTTCGATATGATGCTCTTCATCGCGATC
Ipa.ADAB-aac94c07.b1 IPA1-root Arachis ipaensis cDNA 5', mRNA sequence.
GW967609.1:144-165
ACCGCGATGAGGAACATCAGATCGAAGAAC144CCCTAACCTCTCTTCATTGTGCACTCCCCGAAGAACGTCGCCGGCGCGCGCG
DSL_001034 Developing seed cDNA library of peanut (Arachis hypogaea) Arachis hypogaea cDNA clone ocpga0_0012_G10.ab1, mRNA sequence.
JK147954.1:32-53
GGGGCGATGAGGAACATCAGATCGGAGAAC32CCCTAACCTCTCTTCATTGTGCACTCCCCGAAGAACGTCGCCGGCGCGCCGC
Arachis hypogaea EST, cultivar Minhua6, clone GFBZZHF01BN4RM.
LN675842.1:163-184
GATCGCGATGAAGAGCATCATATCGAAGAA163CCCTAACCTCTCTTCATTGTGCACTCCGCGAAGAACGTCGCCGGCGCGCGTG
TSA: Arachis hypogaea Ahy.Unigene2581 mRNA sequence.
JR543219.1:197-218
GATCGCGATGAAGAGCATCATATCGAAGAA197CCCTAACCTCTCTTCATTGTGCACTCTGCGAAGAACGTCGTCGGCGCGCGTG
TSA: Arachis hypogaea Ahy.Unigene44166 mRNA sequence.
JR579105.1:173-194
ACCGCGATGAGGAACATCAGATCGAAGAAC173CCCTAACCTCTCTTCATTGTGCACTCCCCGAAGAACGTAAAGAATGTCGTCG
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:55857259-55857280
ACCACGATGAAGAACATCATATCGAAGAAC55857259CCCTAACCTCTCTTCATTGTGCACTCTGCAAAGAACATTGCCGGTGCGCTCG
Arachis hypogaea cultivar Shitouqi chromosome A04.
CP030986.1:8242355-8242376
GATCGCGATGAAGAGCATCATATCGAAGAA8242355CCCTAACCTCTCTTCATTGTGCACTCTGCGAAGAACGTCGTCGGCGCGCGTG
Arachis hypogaea cultivar Shitouqi chromosome A04.
CP030986.1:96192388-96192409
AATCGCGATGAAGAACATCATATCGAAGAA96192388CCCTAACCTCTCTTCATTGTGCACTCCGCGAAGAACGTCACTGGTGCGCGTG
Arachis hypogaea cultivar Shitouqi chromosome B01.
CP030993.1:41082705-41082726
ACCGCGATGAGGAACATCAGATCGAAGAAC41082705CCCTAACCTCTCTTCATTGTGCACTCCCCGAAGAACGTCGCCGGCGCGCGCG
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:92798354-92798375
AATCGCGATGAAGAACATAATATCAAAGAA92798354CCCTAACCTCTCTTCATTGTGCACTCCGCGAAGAACGTCGTCGGCGCGCGTG
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:132363661-132363682
GATCGCGATGAAGAGCATCATATCGAAGAA132363661CCCTAACCTCTCTTCATTGTGCACTCCGCGAAGAACGTCGCCGGCGCGCGTG
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:132418649-132418670
GATCGCGATGAAGAGCATCATATCGAAGAA132418649CCCTAACCTCTCTTCATTGTGCACTCCGCGAAGAACGTCGCCGGCGCGCGTG
Arachis hypogaea cultivar Shitouqi chromosome B07.
CP030999.1:80164355-80164376
ACCGCGATGAGGAACATCAGATCGAAGAAC80164355CCCTAACCTCTCTTCATTGTGCACTCCCCAAAGAATGTCGTCGGCGTGCGCG
Arachis ipaensis cultivar K30076 chromosome 01.
CP049892.1:41928653-41928674
ACCGCGATGAGGAACATCAGATCGAAGAAC41928653CCCTAACCTCTCTTCATTGTGCACTCCCCGAAGAACGTCGCCGGCGCGCGCG
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:130150479-130150500
GATCGCGATGAAGAGCATCATATCGAAGAA130150479CCCTAACCTCTCTTCATTGTGCACTCCGCGAAGAACGTCGCCGGCGCGCGTG
Arachis ipaensis cultivar K30076 chromosome 07.
CP049898.1:80419620-80419641
ACCGCGATGAGGAACATCAGATCGAAGAAC80419620CCCTAACCTCTCTTCATTGTGCACTCCCCAAAGAATGTCGTCGGCGTGCGCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCACAATGAAGAGAGGTTAGGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCACAATGAAGAGAGGTTAGGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.126 | 0.117 | search_plus_done; http://172.18.8.135:50400/match?q=GCACAATGAAGAGAGGTTAGGG&k=0&no_gap=0&offset=0&limit=50
0.427 | 0.301 | search_minus_done; http://172.18.8.135:50400/match?q=CCCTAACCTCTCTTCATTGTGC&k=0&no_gap=0&offset=0&limit=35
0.438 | 0.010 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).