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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-15 09:43:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Raphanus sativus genome assembly, chromosome: 1.
LR778310.1:45219464-45219485
TTGTGTTGATGGGTCAGGGACGACGGAGAG45219464GGAAGACGTGAAGGTAATGCAGATGAGAAGAGAGACGAGTAGGTGAACGAAT
Raphanus sativus genome assembly, chromosome: 6.
OY743212.1:45219464-45219485
TTGTGTTGATGGGTCAGGGACGACGGAGAG45219464GGAAGACGTGAAGGTAATGCAGATGAGAAGAGAGACGAGTAGGTGAACGAAT
RS2DV03TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EY939421.1:73-94
ATTCGTTCACCTACTCGTCTCTCTTCTCAT73CTGCATTACCTTCACGTCTTCCCTCTCCGTCGTCCCTGACCCATCAACACAA
RS2GA85TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
FD946400.1:67-88
ATTCGTTCACCTACTCGTCTCTCTTCTCAT67CTGCATTACCTTCACGTCTTCCCTCTCCGTCGTCCTTGACCCATCAACACAA
RR1H496TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence.
FD965739.1:72-93
ATTCGTTCACCTACTCGTCTCTCTTCTCAT72CTGCATTACCTTCACGTCTTCCCTCTCCGTCGTCCCTGACCCATCAACACAA
TSA: Raphanus sativus var. sativus RNA, contig: WG3_29186.
FX680924.1:92-113
ATTCGTTCACCTACTCGTCTCTCTTCTCAT92CTGCATTACCTTCACGTCTTCCCTCTCCGTCGTCCCTGACCCATCAACACAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGAAGACGTGAAGGTAATGCAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAAGACGTGAAGGTAATGCAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.115 | 0.106 | search_plus_done; http://172.18.8.135:50400/match?q=GGAAGACGTGAAGGTAATGCAG&k=0&no_gap=0&offset=0&limit=50
0.309 | 0.194 | search_minus_done; http://172.18.8.135:50400/match?q=CTGCATTACCTTCACGTCTTCC&k=0&no_gap=0&offset=0&limit=48
0.312 | 0.003 | cgi_end;

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