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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-08 06:23:27, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica oleracea var. viridis mRNA, clone: KALE-001G06, 5' end sequence.
DK456097.1:1-22
1GGACATCTCTTCTCGCCTCTTTTCCTTTAACAAACTATTTGGAATCTAATTT
RS1AM35TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence.
EW715502.1:1-22
1GGACATCTCTTCTCGCCTCTTTTCCTTTAACAAATTATTTGGAATCTAACAA
RS1B755TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence.
EW717953.1:1-22
1GGACATCTCTTCTCGCCTCTTTTCCTTTAACAAATTATTTGGAATCTAACAA
RS2AU71TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EW725762.1:1-22
1GGACATCTCTTCTCGCCTCTTTTCCTTTAACAAACTATTTGAAATCTAATTT
RS2D393TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EX898215.1:1-22
1GGACATCTCTTCTCGCCTCTTTTCCTTTAACAAACTATTTGAAATCTAATTT
RR1DL37TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence.
EY898585.1:1-22
1GGACATCTCTTCTCGCCTCTTTTCCTTTAACAAACTATTTGAAATCTAATTT
RR1DP12TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence.
EY898927.1:1-22
1GGACATCTCTTCTCGCCTCTTTTCCTTTAACAAACTATTTGAAATCTAATTT
RS2DZ36TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EY939804.1:1-22
1GGACATCTCTTCTCGCCTCTTTTCCTTTAACAAATTATTTGGAATCTAACAA
RR1FT06TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence.
FD536335.1:1-22
1GGACATCTCTTCTCGCCTCTTTTCCTTTAACGAACTATTTGAAATCTAATTT
RS1EW32TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence.
FD562161.1:1-22
1GGACATCTCTTCTCGCCTCTTTTCCTTTAACAAACTATTTGAAATCTAATTT
RS1GO12TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence.
FD940325.1:1-22
1GGACATCTCTTCTCGCCTCTTTTCCTTTAACAAACTATTTGAAATCTAATCT
RR1FT06JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence.
FD531827.1:667-688
AAATTAGATTTCAAATAGTTCGTTAAAGGA667AAAGAGGCGAGAAGAGATGTCC
RR3GZ41JQ RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
FD977101.1:656-677
TTGTTAGATTCCAAATAATTTGTTAAAGGA656AAAGAGGCGAGAAGAGATGTCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGACATCTCTTCTCGCCTCTTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGACATCTCTTCTCGCCTCTTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.934 | 0.926 | search_plus_done; http://172.18.8.135:50400/match?q=GGACATCTCTTCTCGCCTCTTT&k=0&no_gap=0&offset=0&limit=50
1.092 | 0.157 | search_minus_done; http://172.18.8.135:50400/match?q=AAAGAGGCGAGAAGAGATGTCC&k=0&no_gap=0&offset=0&limit=39
1.093 | 0.002 | cgi_end;

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