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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-01-05 03:50:35, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Macaca fascicularis isolate 582-1 chromosome 2.
CP141360.1:200734851-200734870
GACTGGGAGGCTGGTGTGATCCACGGAGAG200734851GGAGGAAGAGCAGAGTGGTGTACTGCTCACCTGAGAGCCACACAGGGAAG
Acomys percivali genome assembly, chromosome: 15.
OU015756.1:46663891-46663910
CCTTGATGGGACACTTAAACTCATCTGTGA46663891GGAGGAAGAGCAGAGTGGTGAGGGACAGGGAAACGGGCTGGGACTGGTAG
Peromyscus eremicus genome assembly, chromosome: 23.
OX460416.1:23068569-23068588
GGACCAGAATAGCTCATAGTGTGGTTGACT23068569GGAGGAAGAGCAGAGTGGTGATAGGAAAGGACATGGAAAGACATCACTCT
Peromyscus eremicus genome assembly, chromosome: 23.
OX460488.1:24824411-24824430
GGACCAGAATAGCTCATAGTGTGGTTGACT24824411GGAGGAAGAGCAGAGTGGTGATAGGAAAGGACATGGAAAGACATCACTCT
Balaenoptera acutorostrata genome assembly, chromosome: 5.
OX465354.1:55813229-55813248
TGCACAGAAGGATACATTTCTGTGGGTCAG55813229GGAGGAAGAGCAGAGTGGTGTGGGTGAGGTACACGAAGCATTGGAGAAAC
Homo sapiens clone RP11-21J10, WORKING DRAFT SEQUENCE, 16 unordered pieces.
AC025616.3:100623-100642
GACTAGGAGGCTGGTGTGATCCACAGAGAA100623GGAGGAAGAGCAGAGTGGTGTACTGCTCACCTGAGAGCCACACAGGGTAG
Urochloa decumbens genome assembly, chromosome: 7b.
OZ075117.1:17303159-17303178
AGCTGACCAGCGGCCCAGAAGCTTTCACAT17303159GGAGGAAGAGCAGAGTGGTGGCTGGAGTTTTTGCCGCTAGTCGCCCGAGG
Octopus vulgaris genome assembly, chromosome: 8.
OX597821.1:3899181-3899200
AGAAGAGTGGAGGAAGAAGAGAAGAGTGGA3899181GGAGGAAGAGCAGAGTGGTGGAATATGAAGAGGAGGAGTGTAGAGAAAGA
Electrona antarctica genome assembly, chromosome: 9.
OX578254.1:36354799-36354818
GGGCTGGGACAAGATGGAGGAGGAGGAGAA36354799GGAGGAAGAGCAGAGTGGTGAAGGACCGAGGGCAGAGACGGACGTCCTGA
Fringilla coelebs genome assembly, chromosome: 2.
OY740725.1:9847404-9847423
TGGTGTGCTGCAGCATCCCTGGGAGAGGAG9847404GGAGGAAGAGCAGAGTGGTGAAAAGGGGCTGGGAGCTCAGCCTTCTCTCC
Protomyctophum parallelum genome assembly, chromosome: 8.
OZ077150.1:11615677-11615696
GGGCTGGGACAAGATGGAGGAGGAGGAGAA11615677GGAGGAAGAGCAGAGTGGTGAAGGACCGAGGACAGAGACGGACGTCCTGA
Protomyctophum parallelum genome assembly, chromosome: 8.
OZ077174.1:9124799-9124818
GGGCTGGGACAAGATGGAGGAGGAGGAGAA9124799GGAGGAAGAGCAGAGTGGTGAAGGACCGAGGACAGAGACGGACGTCCTGA
Lissotriton vulgaris genome assembly, chromosome: 10.
OZ183362.1:1084466811-1084466830
TTTATCAAGAGCACCAGCCGAAGAAGAGGA1084466811GGAGGAAGAGCAGAGTGGTGATCCCATTCTGGAGGTGAGCCTAGCAGCAG
Homo sapiens 3 BAC RP11-354H21 (Roswell Park Cancer Institute Human BAC Library) complete sequence.
AC117462.5:10554-10573
CTACCCTGTGTGGCTCTCAGGTGAGCAGTA10554CACCACTCTGCTCTTCCTCCTTCTCTGTGGATCACACCAGCCTCCTAGTC
Homo sapiens DNA, chromosome 3, nearly complete genome.
AP023463.1:78070174-78070193
CTACCCTGTGTGGCTCTCAGGTGAGCAGTA78070174CACCACTCTGCTCTTCCTCCTTCTCTGTGGATCACACCAGCCTCCTAGTC
Homo sapiens isolate CHM13 chromosome 3.
CP068275.2:78058555-78058574
CTACCCTGTGTGGCTCTCAGGTGAGCAGTA78058555CACCACTCTGCTCTTCCTCCTTCTCTGTGGATCACACCAGCCTCCTAGTC
Homo sapiens isolate NA24385 chromosome 3.
CP139518.2:77978852-77978871
CTACCCTGTGTGGCTCTCAGGTGAGCAGTA77978852CACCACTCTGCTCTTCCTCCTTCTCTGTGGATCACACCAGCCTCCTAGTC
Homo sapiens isolate NA24385 chromosome 3.
CP139541.2:78063177-78063196
CTACCCTGTGTGGCTCTCAGGTGAGCAGTA78063177CACCACTCTGCTCTTCCTCCTTCTCTGTGGATCACACCAGCCTCCTAGTC
Sciurus carolinensis genome assembly, chromosome: 15.
LR738605.1:24265255-24265274
CCCCCTTTGTCCACTTGGAATTGAAAACTC24265255CACCACTCTGCTCTTCCTCCCGTTCCTTAACCTCCTTATTTACTTGGAGA
Spermophilus citellus genome assembly, chromosome: 10.
OZ077388.1:29129684-29129703
TGGTTCTCACCAAGCCCTTCCACTTCACCA29129684CACCACTCTGCTCTTCCTCCTCAAGGACCAGTGGCTGCTGCAAGAAGTCT
Vulpes vulpes genome assembly, chromosome: 8.
OZ067169.1:75475035-75475054
TATTATTTTACTAATTTTCCCAAATCTTCT75475035CACCACTCTGCTCTTCCTCCCAATTTGGAACATTCCCACATTAACTTTCA
Vulpes vulpes genome assembly, chromosome: 8.
OZ067320.1:74950111-74950130
TATTATTTTACTAATTTTCCCAAATCTTCT74950111CACCACTCTGCTCTTCCTCCCAATTTGGAACATTCCCACATTAACTTTCA
Eukaryotic synthetic construct chromosome 3.
CP034502.1:77992870-77992889
CTACCCTGTGTGGCTCTCAGGTGAGCAGTA77992870CACCACTCTGCTCTTCCTCCTTCTCTGTGGATCACACCAGCCTCCTAGTC
Eukaryotic synthetic construct chromosome 3.
CP034527.1:77992870-77992889
CTACCCTGTGTGGCTCTCAGGTGAGCAGTA77992870CACCACTCTGCTCTTCCTCCTTCTCTGTGGATCACACCAGCCTCCTAGTC
Linum trigynum genome assembly, chromosome: 5.
OZ034818.1:14972171-14972190
CACTCATCGTCGAAAAATCGCAACCCAAAA14972171CACCACTCTGCTCTTCCTCCCCCTCCACAACACCTCCATTCTAGGCCTCC
Suillia affinis genome assembly, chromosome: 5.
OZ211076.1:44421034-44421053
TAACGACCATTGTGTCCAAGTATGGTAATT44421034CACCACTCTGCTCTTCCTCCTTCGTAAATTTTATGTGTTTGTTGCATTTG
Pollachius pollachius genome assembly, chromosome: 7.
OX465130.1:9478991-9479010
TGTTAGTTTGATAGACTGTGGTCTCTGACT9478991CACCACTCTGCTCTTCCTCCTCTGTTAGGTTCCACTGAGACAGTAGAGAT
Sprattus sprattus genome assembly, chromosome: 3.
OY735287.1:58091930-58091949
CTGGGTTATGGGCCCAGGACGCTTCCGCTG58091930CACCACTCTGCTCTTCCTCCATGCAGTTAACCTCCTGCCGTACTTCACAT
Sprattus sprattus genome assembly, chromosome: 3.
OY735287.1:58112752-58112771
CTGGGTTATGGGCCCAGCACGCTTCCGCTG58112752CACCACTCTGCTCTTCCTCCCTGCAGTTAACCTCCTGCCGTACTTCACAT
Sprattus sprattus genome assembly, chromosome: 3.
OY735287.1:58118548-58118567
CTGGGTTATGGGCCCAGCACGCTTCCGCAG58118548CACCACTCTGCTCTTCCTCCCTGCAGTTAACCTCCTGCCGTACTTCACAT
Sprattus sprattus genome assembly, chromosome: 3.
OY735287.1:58120460-58120479
CTGGGTTATGGGCCCAGCACGCTTCCGCTG58120460CACCACTCTGCTCTTCCTCCCTGCAGTTAACCTCCTGCCGTACTTCACAT
Sprattus sprattus genome assembly, chromosome: 3.
OY735287.1:58121062-58121081
CTGGGTTATGGGCCCAGCACGCTTCCGCTG58121062CACCACTCTGCTCTTCCTCCCTGCAGTTAACCTCCTGCCGTACTTCACAT
Lissotriton vulgaris genome assembly, chromosome: 9.
OZ183361.1:229352241-229352260
CTGCTGCTAGGCTTACTTCCAGAATGGATT229352241CACCACTCTGCTCTTCCTCCTCCTCTTCATCGGTTGGTGCTCTCTATAAA
Lissotriton vulgaris genome assembly, chromosome: 9.
OZ183361.1:744974047-744974066
CTGCTGCTATGCTCACCTCTAGAATGGAAT744974047CACCACTCTGCTCTTCCTCCTCCTCTTCTTCGGTTGGTGCTCTCGAAAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGAGGAAGAGCAGAGTGGTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAGGAAGAGCAGAGTGGTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.372 | 0.363 | search_plus_done; http://172.18.8.135:50800/match?q=GGAGGAAGAGCAGAGTGGTG&k=0&no_gap=0&offset=0&limit=50
0.536 | 0.165 | search_minus_done; http://172.18.8.135:50800/match?q=CACCACTCTGCTCTTCCTCC&k=0&no_gap=0&offset=0&limit=37
0.550 | 0.014 | cgi_end;

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