GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-10 10:11:27, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

EST706067 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POAB221 5' end, mRNA sequence.
CK259989.1:796-815
GAGGCCGTGGCCGTGGAAGGGGAACTCGTG796GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGGCGGTGGTGC
EST706977 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POAB635 5' end, mRNA sequence.
CK260899.1:796-815
GAGGCCGTGGCCGTGGAAGGGGAACTCGTG796GTAGGGGACGTGGATTCAGAT
EST709091 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POABJ81 5' end, mRNA sequence.
CK263013.1:795-814
GAGGCCGTGGCCGTGGAAGGGGAACTCGTG795GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGCGGTGGTGCT
EST709225 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POABK66 5' end, mRNA sequence.
CK263147.1:795-814
GAGGCCGTGGCCGTGGAAGGGGAACTCGTG795GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGCGGTGGTGCT
EST711211 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POABW95 5' end, mRNA sequence.
CK265133.1:798-817
GAGGCCGTGGCCGTGGAAGGGGAACTCGTG798GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGCGGTGGTGCT
EST713959 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POACD33 5' end, mRNA sequence.
CK267881.1:795-814
GAGGCCGTGGCCGTGGAAGGGGAACTCGTG795GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGCGGTGGTGCT
EST716385 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POACS36 5' end, mRNA sequence.
CK270307.1:793-812
GAGGCCGTGGCCGTGGAAGGGGAACTCGTG793GTAGGGGACGTGGATTCAGATCTAATGGGCCGAATCCAGGCGGTGGTGCT
EST720883 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POADJ52 5' end, mRNA sequence.
CK274805.1:781-800
GAGGCCGTGGCCGTGGAAGGGGAACTCGTG781GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGCGGTGGTGCT
EST721606 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POADN95 5' end, mRNA sequence.
CK275528.1:798-817
GAGGCCGTGGCCGTGGAAGGGGAACTCGTG798GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGCGGTGGTGCT
EST721722 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POADO68 5' end, mRNA sequence.
CK275644.1:795-814
GAGGCCGTGGCCGTGGAAGGGGAACTCGTG795GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGCGGTGGTGCT
EST721729 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POADO72 5' end, mRNA sequence.
CK275651.1:678-697
GAGGCCGTGGCCGTGGAAGGGGAACTCGTG678GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGCGGTGGTGCT
EST723809 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POAE156 5' end, mRNA sequence.
CK277731.1:785-804
GAGGCCGTGGCCGTGGAAGGGGAACTCGTG785GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAGGGCGGTGGTGCT
EST725221 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POAEA42 5' end, mRNA sequence.
CK279143.1:795-814
GAGGCCGTGTCCGTGGAAGGGGAACTCGTG795GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGCGGTGGTGCT
EST725297 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POAEA86 5' end, mRNA sequence.
CK279219.1:788-807
GAGGCCGTGGCCGTGGAAGGGGAACTCGTG788GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGCGGTGGTGCT
EST725834 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POAEE08 5' end, mRNA sequence.
CK279756.1:795-814
GAGGCCGTGGCCGTGGAAGGGGAACTCGTG795GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGCGGTGGTGCT
74424.1 Swollen Stolon Solanum tuberosum cDNA clone 74424 5', mRNA sequence.
CV302443.1:545-564
GAGGCCGTGGCCGTGGAAGGGGAACTCGTG545GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGCGGTGGTGCT
55646.1 After-Cooking Darkening C Solanum tuberosum cDNA clone 55646 5', mRNA sequence.
CV431398.1:701-720
GAGGCCGTGGCCGTGGAAGGGGAACTCGTG701GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGCGGTGGTGCT
49271.1 Late Blight-Challenged Tubers Solanum tuberosum cDNA clone 49271 5', mRNA sequence.
DN588584.1:33-52
CGAGGCGTGGCCGTGGAAGGGGAACTCGTG33GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGCGGTGGTGCT
92966.1 Cold Sweetening C Solanum tuberosum cDNA clone 92966 5', mRNA sequence.
DV623519.1:788-807
GAGGCCGTGGCCGTGGAAGGGGAACTCGTG788GTAGGGGACGTGGATTCAGATCTAATGCGCCGATCCAAGGCGGTGGTGCT
Solanum melongena mRNA, clone: AE007D10, 5'end, expressed in ovary at anthesis.
FS003589.1:15-34
AAGGGGAACTCGTG15GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGCGGTGGTGCT
Solanum melongena mRNA, clone: CPA03N12, 5'end, expressed in ovary at 24h after anthesis.
FS016420.1:129-148
GAGGCCGTGGCCGTGGAAGGGGAACTCGTG129GTAGGGGACGTGGATTCAGATCCAATGGGCCGATCCAAGGCGGTGGTGCT
Solanum torvum mRNA, clone: TVR11I16, 5'end, expressed in root at vegetative stage, 2 months after germination.
FS111020.1:197-216
GAGGCCGTGGCCGTGGAAGGGGAACTCGTG197GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGTGTCGGTGCT
Solanum torvum mRNA, clone: TVR15L03, 5'end, expressed in root at vegetative stage, 2 months after germination.
FS113488.1:482-501
GAGGCCGTGGCCGTGGAAGGGGAACTCGTG482GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGTGTTGGTGCT
LA1777T1L2B2_02_D13_T7-ZL LA1777 Type I trichomes Solanum habrochaites cDNA, mRNA sequence.
GT161246.1:534-553
GAGGCCGTGGCCGTGGAAGGGGAACTCGTG534GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGCGGTGGTGCT
SRN_T3_098_C11_27MAY2005_091.1 SRN (roots from Solanum tuberosum Shepody fertilized with nitrogen) Solanum tuberosum cDNA clone SRN_T3_098_C11_27MAY2005_091 5', mRNA sequence.
JG565070.1:341-360
GAGGCCGTGGCCGTGGAAGGGGAACTCGTG341GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGCGGTGGTGCT
SRN_T3_158_A10_10JUN2005_080.1 SRN (roots from Solanum tuberosum Shepody fertilized with nitrogen) Solanum tuberosum cDNA clone SRN_T3_158_A10_10JUN2005_080 5', mRNA sequence.
JG565789.1:149-168
GAGGCCGTGGCCGTGGAAGGGGAACTCGTG149GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGCGGTGGTGCT
Solanum lycopersicum cDNA, clone: LEFL1070CE07, HTC in leaf.
AK324053.1:803-822
GAGGCCGTGGCCGTGGAAGGGGAACTCGCG803GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGAGGTGGTGCT
Solanum tuberosum strain Diploid genotype RH89-039-16 chromosome 4 clone RH073D11, *** SEQUENCING IN PROGRESS ***, 8 unordered pieces.
AC236744.2:111234-111253
TAGGCCGTGGCCGTGGAAGGGGAACTCGTG111234GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGCGGTGGTGCT
Lycopersicon esculentum clone 132757F, mRNA sequence.
BT013828.1:1866-1885
GAGGCCGTGGCCGTGGAAGGGGAACTCGCG1866GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGAGGTGGTGCT
S.lycopersicum DNA sequence from clone LE_HBa-110G11 on chromosome 4.
CU914753.2:4098-4117
TAGGCCGTGGCCGTGGAAGGGGAACTCGCG4098GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGAGGTGGTGCT
Solanum dulcamara genome assembly, chromosome: 9.
OX359260.1:1157985-1158004
TAGGCCGTGGCCGTGGAAGGGGAACTCGCG1157985GTAGGGGACGTGGATTCAGATCTAATGGGCCGATCCAAGGCGGTGGTGCT
Oldenlandia corymbosa var. corymbosa genome assembly, chromosome: 8.
OX459125.1:24765963-24765982
TAGGACGTGGCCGTGGGAGGGGAACTCGTG24765963GTAGGGGACGTGGATTCAGATCCAATGGTCAGATCCATGCGGCCGTTCAA
cC-esflcLEL13D13d1 Tomato flower library from a mixture of developmental stages Solanum lycopersicum cDNA clone cC-esflcLEL13D13d1, mRNA sequence.
BG626548.1:223-242
AGCACCACCTCCTTGGATCGGCCCATTAGA223TCTGAATCCACGTCCCCTACCGCGAGTTCCCCTTCCACGGCCACGGTCTC
cC-esflcLEL25A15a1 Tomato flower library from a mixture of developmental stages Solanum lycopersicum cDNA, mRNA sequence.
BG735061.1:310-329
AGCACCACCTCCTTGGATCGGCCCATTAGA310TCTGAATCCACGTCCCCTACCGCGAGTTCCCCTTCCACGGCC
EST604468 mixed potato tissues Solanum tuberosum cDNA clone STMEF58 3' end, mRNA sequence.
BQ118892.1:336-355
AGCACCACCGCCTTGGATCGGCCCATTAGA336TCTGAATCCACGTCCCCTACCACGAGTTCCCCTTCCACGGCCACGGCCTC
EST706068 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POAB221 3' end, mRNA sequence.
CK259990.1:70-89
AGCCCCCCCCCCTTGGATCGGCCCATTAAA70TCTGAATCCACGTCCCCTACCACGAGTTCCCCTTCCACGGCCACGGCCTC
EST706978 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POAB635 3' end, mRNA sequence.
CK260900.1:341-360
AGCACCACCGCCTTGGATCGGCCCATTAGA341TCTGAATCCACGTCCCCTACCACGAGTTCCCCTTCCACGGCCACGGCCTC
EST709092 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POABJ81 3' end, mRNA sequence.
CK263014.1:340-359
AGCACCACCGCCTTGGATCGGCCCATTAGA340TCTGAATCCACGTCCCCTACCACGAGTTCCCCTTCCACGGCCACGGCCTC
EST709226 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POABK66 3' end, mRNA sequence.
CK263148.1:297-316
AGCACCACCGCCTTGGATCGGCCCATTAGA297TCTGAATCCACGTCCCCTACCACGAGTTCCCCTTCCACGGCCACGGCCTC
EST711212 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POABW95 3' end, mRNA sequence.
CK265134.1:341-360
AGCACCACCGCCTTGGATCGGCCCATTAGA341TCTGAATCCACGTCCCCTACCACGAGTTCCCCTTCCACGGCCACGGCCTC
EST716386 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POACS36 3' end, mRNA sequence.
CK270308.1:71-90
AGCACCACCGCCTTGGATCGGCCCATTAAA71TCTGAATCCACGTCCCCTACCACGAGTTCCCCTTCCACGGCCACGGCCTC
EST720884 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POADJ52 3' end, mRNA sequence.
CK274806.1:357-376
AGCACCACCGCCTTGGATCGGCCCATTAGA357TCTGAATCCACGTCCCCTACCACGAGTTCCCCTTCCACGGCCACGGCCTC
EST721723 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POADO68 3' end, mRNA sequence.
CK275645.1:341-360
AGCACCACCGCCTTGGATCGGCCCATTAGA341TCTGAATCCACGTCCCCTACCACGAGTTCCCCTTCCACGGCCACGGCCTC
EST721730 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POADO72 3' end, mRNA sequence.
CK275652.1:341-360
AGCACCACCGCCTTGGATCGGCCCATTAGA341TCTGAATCCACGTCCCCTACCACGAGTTCCCCTTCCACGGCCACGGCCTC
EST721860 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POADP51 3' end, mRNA sequence.
CK275782.1:268-287
AGCACCACCGCCTTGGATCGGCCCATTAGA268TCTGAATCCACGTCCCCTACCACGAGTTCCCCTTCCACGGCCACGGCCTC
EST722901 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POADV95 3' end, mRNA sequence.
CK276823.1:69-88
AACACCCCCCCCTTGGATCGGCCCCTTAAA69TCTGAATCCACGTCCCCTACCACGAGTTCCCCTTCCACGGCCACGGCCCC
EST723810 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POAE156 3' end, mRNA sequence.
CK277732.1:341-360
AGCACCACCGCCTTGGATCGGCCCATTAGA341TCTGAATCCACGTCCCCTACCACGAGTTCCCCTTCCACGGCCACGGCCTC
EST725222 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POAEA42 3' end, mRNA sequence.
CK279144.1:342-361
AGCACCACCGCCTTGGATCGGCCCATTAGA342TCTGAATCCACGTCCCCTACCACGAGTTCCCCTTCCACGGACACGGCCTC
EST725298 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POAEA86 3' end, mRNA sequence.
CK279220.1:341-360
AGCACCACCGCCTTGGATCGGCCCATTAGA341TCTGAATCCACGTCCCCTACCACGAGTTCCCCTTCCACGGCCACGGCCTC
EST725835 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POAEE08 3' end, mRNA sequence.
CK279757.1:340-359
AGCACCACCGCCTTGGATCGGCCCATTAGA340TCTGAATCCACGTCCCCTACCACGAGTTCCCCTTCCACGGCCACGGCCTC
Solanum lycopersicum DNA, clone: MTBAC053I20_T7.
FT259372.1:38-57
ACCACTACCTCCTTGGATCGGCCCATTAGA38TCTGAATCCACGTCCCCTACCGCGAGTTCCCCTTCCACGGCCACGGCCTA
Eustoma grandiflorum DNA, chromosome 26, draft genome sequence.
AP025065.1:7379375-7379394
AGCAGATGCACGCACTGGTGGTCCATTAGA7379375TCTGAATCCACGTCCCCTACCACGTGTTCCCCGTCCACGTCCTCGGACAC
Solanum lycopersicum Micro-Tom DNA, chromosome 4, draft genome sequence.
AP028938.1:67626210-67626229
AGCACCACCTCCTTGGATCGGCCCATTAGA67626210TCTGAATCCACGTCCCCTACCGCGAGTTCCCCTTCCACGGCCACGGCCTA
Solanum lycopersicum cultivar I-3 chromosome 4.
CP023760.1:65747963-65747982
AGCACCACCTCCTTGGATCGGCCCATTAGA65747963TCTGAATCCACGTCCCCTACCGCGAGTTCCCCTTCCACGGCCACGGCCTA
Solanum tuberosum cultivar P8 chromosome 4.
CP046685.1:71132508-71132527
AGCACCACCGCCTTGGATCGGCCCATTAGA71132508TCTGAATCCACGTCCCCTACCACGAGTTCCCCTTCCACGGCCACGGCCTA
Solanum tuberosum cultivar MSH/14-112 chromosome 4.
CP046699.1:71126501-71126520
AGCACCACCGCCTTGGATCGGCCCATTAGA71126501TCTGAATCCACGTCCCCTACCACGAGTTCCCCTTCCACGGCCACGGCCTA
Solanum pinnatisectum cultivar CGN17745 chromosome 4.
CP047561.1:71105554-71105573
AGCACCACCGCCTTGGATCGGCCCATTAGA71105554TCTGAATCCACGTCCCCTACCACGAGTTCCCCTTCCACGGCCACGGCCTA
Solanum tuberosum cultivar Solyntus chromosome 4.
CP055237.1:71072255-71072274
AGCACCACCACCTTGGATCGGCCCATTAGA71072255TCTGAATCCACGTCCCCTACCACGAGTTCCCCTTCCACGGCCACGGCCTA
Solanum pennellii chromosome ch04, complete genome.
HG975443.1:76391117-76391136
AGCACCACCGCCTTGGATCGGCCCATTAGA76391117TCTGAATCCACGTCCCCTACCACGAGTTCCCCTTCCACGGCCACGGCCTA
Solanum lycopersicum chromosome ch04, complete genome.
HG975516.1:63340912-63340931
AGCACCACCTCCTTGGATCGGCCCATTAGA63340912TCTGAATCCACGTCCCCTACCGCGAGTTCCCCTTCCACGGCCACGGCCTA
Solanum lycopersicum genome assembly, chromosome: 4.
OU640347.1:66921349-66921368
AGCACCACCTCCTTGGATCGGCCCATTAGA66921349TCTGAATCCACGTCCCCTACCGCGAGTTCCCCTTCCACGGCCACGGCCTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).