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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-16 01:49:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mobula hypostoma genome assembly, chromosome: 15.
OY992606.1:21742395-21742414
TCTCATGGGGCAGCAGTATCGAGGATAATA21742395GTGACATTGGTGTTGCTGCTCACTGTTACTGACTGCGGTCTGTTGGTCAG
Trifolium dubium genome assembly, chromosome: 10.
OX638071.1:16976881-16976900
GGTCTGGTAATGGTGATGATGATGAATCTT16976881GTGACATTGGTGTTGCTGCTGCACATGTAACACAATTGTAGTAGTTCATG
Trifolium dubium genome assembly, chromosome: 14.
OX638075.1:14846805-14846824
CTGGTAATGGTGAAGATGATGATGAATCTT14846805GTGACATTGGTGTTGCTGCTGCACATGTAACACAATTGTAGTAGTTCATT
Haladaptatus halobius strain PSR5 plasmid unnamed4, complete sequence.
CP085340.1:73045-73064
TGACATCGCCATTGGCGTGAGATGCGGTGT73045GTGACATTGGTGTTGCTGCTGTTTACAGCTTACAGATAATAAGTAATGAA
Limnephilus marmoratus genome assembly, chromosome: 4.
OU862909.1:49924629-49924648
TAATCAAAGTAAGTTCGAGTTCGTCTTGAA49924629GTGACATTGGTGTTGCTGCTGCTGCTGCTGCATATCTCTCCAGATTAGCG
Limnephilus marmoratus genome assembly, chromosome: 16.
OU862922.1:21740679-21740698
TAATCAAAGTAAGTTCGACTTCGTCTTGAA21740679GTGACATTGGTGTTGCTGCTGCTGCTGCGTATGTCTCCAGATTAGCGAGA
Limnephilus rhombicus genome assembly, chromosome: 12.
OV815282.1:12729322-12729341
TAATCAAAGTAAGTTCGAGTTCATCTTGAA12729322GTGACATTGGTGTTGCTGCTGCTGCTGCGTAAGTCTACAGATTAGCGAGA
Trisateles emortualis genome assembly, chromosome: Z.
OX352729.1:23193177-23193196
GGCCAGAAACTTTAGCAATAAAATGCAAAT23193177GTGACATTGGTGTTGCTGCTAGATTACGGGGCCTGTGAGGGATCTAGTCT
Cabera pusaria genome assembly, chromosome: 23.
OX940908.1:4720989-4721008
GCGCTGCTGCAGATGGCGCTGCTATGGTGG4720989GTGACATTGGTGTTGCTGCTGGCTCTTCCAATGTGGATGTTCCTTCTCCC
Cabera pusaria genome assembly, chromosome: 25.
OX940910.1:3932147-3932166
GAGCTGCTGCAGGTGGCGCTACCATAGTGG3932147GTGACATTGGTGTTGCTGCTGGCTCTTCCAATGTGGATGTTCCTCCTCCC
Osmerus eperlanus genome assembly, chromosome: 6.
OY830019.1:5639292-5639311
ACATCAGGAGACTTAGAACAGGTCAACCAC5639292AGCAGCAACACCAATGTCACCACAAAGACATTGGAGGACATTAAGAAACA
Trifolium repens mRNA, clone: WCC07j12_086, unspecified EST.
FY456617.1:89-108
CATGAATTACTACTACTGTGTTACATGTGC89AGCAGCAACACCAATGTCACAAGATTCATCATCATCATCATCATCACCAT
Trifolium repens mRNA, clone: WCC21b18_082, unspecified EST.
FY461341.1:79-98
CATGAACTACTACAACTGTGTTACATGTGC79AGCAGCAACACCAATGTCACAAGATTCATCATCATCATCACCATTACCAG
Trifolium repens mRNA, clone: WCC38l22_062, unspecified EST.
FY467645.1:67-86
CATGAACTACTACAACTGTGTTACATGTGC67AGCAGCAACACCAATGTCACAAGATTCATCATCATCATCATCACCATTAC
Trifolium repens isolate ACLI19 chromosome 04_Occ.
CP125842.1:16528112-16528131
CATGAATTACTACAACTGTGTTACATGTGC16528112AGCAGCAACACCAATGTCACAAGATTCATCATCATCATCATCACCATTAC
Trifolium repens isolate ACLI19 chromosome 04_Pall.
CP125843.1:17475196-17475215
CATGAACTACTACAACTGTGTTACATGTGC17475196AGCAGCAACACCAATGTCACAAGATTCATCATCATCATCATCATCATCAT
Ilex aquifolium genome assembly, chromosome: 4.
OX637394.1:7645846-7645865
CTAACACCTAGTGACCTAAGAATCCTCTAA7645846AGCAGCAACACCAATGTCACAAGGAAATAATATTCCATAATCTCCAATCT
Trifolium subterraneum genome assembly, chromosome: 1.
OX637461.1:36970793-36970812
TATGAATTACTACAACTGTGTTACATGTGC36970793AGCAGCAACACCAATGTCACAAGATTCTTCATCATCACCATTACCAGACC
Limnephilus lunatus genome assembly, chromosome: 11.
OU830602.1:81343582-81343601
GAAGCGTAGTTCATACGTGTACGCAGCAGC81343582AGCAGCAACACCAATGTCACTTCAAAAATTACTTTGATTAGTATGAAGAG
Limnephilus marmoratus genome assembly, chromosome: 5.
OU862910.1:17154760-17154779
GAGACTTACGCACGAGACTTACGGAGCAGC17154760AGCAGCAACACCAATGTCACTTCAAGACGAACTCGAACTTACTTTGGTTA
Limnephilus marmoratus genome assembly, chromosome: Z.
OU862920.1:52314268-52314287
CGCTAATCTGGAGACTTACGCAACAGCAGC52314268AGCAGCAACACCAATGTCACTTCAAGACGAACTCGAACTTACTTTGGTCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTGACATTGGTGTTGCTGCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTGACATTGGTGTTGCTGCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.122 | 0.113 | search_plus_done; http://172.18.8.135:50400/match?q=GTGACATTGGTGTTGCTGCT&k=0&no_gap=0&offset=0&limit=50
0.386 | 0.264 | search_minus_done; http://172.18.8.135:50400/match?q=AGCAGCAACACCAATGTCAC&k=0&no_gap=0&offset=0&limit=40
0.393 | 0.007 | cgi_end;

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