GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-17 18:27:53, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CsB10STC_Bam_34C02R_780 ends of BAC library of B10 line of Cucumis sativus L. (BamHI) Cucumis sativus genomic, genomic survey sequence.
GS840579.1:229-248
GAGCTGGTGTAGTGGGATGAATAACAATTT229TAGGGCAGGTATTATTTCAGTTATATATATATATATATATATTATATTAA
Cucumber DNA for malate synthase (EC 4.1.3.2).
X15425.1:2477-2496
GAGCTGGTGTAGTGGGATGAATAACAATTT2477TAGGGCAGGTATTATTTCAGTTATATATATATATATATATATTATATTAA
Actenicerus siaelandicus genome assembly, chromosome: 9.
OZ174155.1:4299197-4299216
ACATTGTCTAACTGTCAAAATTGGTTAGGT4299197TAGGGCAGGTATTATTTCAGTTTTTGTAATTTAATATCCCTATTTGATTT
Diplosoma virens genome assembly, chromosome: 5.
OY796884.1:48613571-48613590
GAATCAGTTGATGATGAGACAGTGGCCTGG48613571CTGAAATAATACCTGCCCTAACATCTGAAGAGTCTTCTGGAAAAAAACAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TAGGGCAGGTATTATTTCAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TAGGGCAGGTATTATTTCAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.298 | 0.289 | search_plus_done; http://172.18.8.135:50800/match?q=TAGGGCAGGTATTATTTCAG&k=0&no_gap=0&offset=0&limit=50
0.404 | 0.105 | search_minus_done; http://172.18.8.135:50800/match?q=CTGAAATAATACCTGCCCTA&k=0&no_gap=0&offset=0&limit=47
0.405 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).