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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-02 03:08:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

PV_GBa0035A09.r PV_GBa Phaseolus vulgaris genomic clone PV_GBa0035A09 3', genomic survey sequence.
EI439739.1:99-118
GACCGATATGCCCCTTTCACCTCTGACTGA99TCACACGAGCTGTCTATGCCCAGAAGCTCATACAAGTCAAAGTCTATCAC
Vigna unguiculata cultivar Xiabao 2 chromosome Vu02.
CP039348.1:3628637-3628656
TTGCGATATGCCACTTTCACCTCTGACTGA3628637TCACACGAGCTGTCTATGCCCAGAAGCTCATACAAGTCAAAGTCTATCAC
Sphenostylis stenocarpa genome assembly, chromosome: 2.
OY731399.1:21393797-21393816
GAGCGATATGCCACTTTCACCTCTGACTGA21393797TCACACGAGCTGTCTATGCCCAGAAGCTCATACAAGTCAAAGTCTACCAT
Pv056B_M13F_A08.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA sequence.
FE709311.1:274-293
GTGATAGACTTTGACTTGTATGATCTTCTG274GGCATAGACAGCTCGTGTGATCAGTCAGAGGTGAAAGGGGCATATCGGTC
Pv036B_M13F_B12.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA sequence.
FE709312.1:266-285
GTGATAGACTTTGACTTGTATGATCTTCTG266GGCATAGACAGCTCGTGTGATCAGTCAGAGGTGAAAGGGGCATATCGGTC
Pv008D_M13F_E04.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA sequence.
FE709313.1:266-285
GTGATAGACTTTGACTTGTATGATCTTCTG266GGCATAGACAGCTCGTGTGATCAGTCAGAGGTGAAAGGGGCATATCGGTC
Pv021A_M13F_G04.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA sequence.
FE709314.1:266-285
GTGATAGACTTTGACTTGTATGATCTTCTG266GGCATAGACAGCTCGTGTGATCAGTCAGAGGTGAAAGGAGCATATCGGTC
Vigna angularis mRNA, clone: VEPS07L24.
HX941292.1:206-225
GTGATAGACTTTGACCTGTATGAGCTTCTG206GGCATAGACAGCTCGTGTGATCAGTCAGAGGTGAAAGTGGCATATCGCAA
Vigna angularis mRNA, clone: VES07A06.
HX944728.1:228-247
GTGATAGACTTTGACCTGTATGAGCTTCTG228GGCATAGACAGCTCGTGTGATCAGTCAGAGGTGAAAGTGGCATATCGCAA
Vigna angularis mRNA, clone: VES19M24.
HX949553.1:254-273
GTGATAGACTTTGACCTGTATGAGCTTCTG254GGCATAGACAGCTCGTGTGATCAGTCAGAGGTGAAAGTGGCATATCGCAA
Vigna unguiculata subsp. unguiculata cultivar IT97K-499-35 clone BAC H018P13, *** SEQUENCING IN PROGRESS ***, 23 unordered pieces.
AC271264.1:158369-158388
GTGATAGACTTTGACTTGTATGAGCTTCTG158369GGCATAGACAGCTCGTGTGATCAGTCAGAGGTGAAAGTGGCATATCGCAA
Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari.
AP015043.1:489337-489356
GTGATAGACTTTGACCTGTATGAGCTTCTG489337GGCATAGACAGCTCGTGTGATCAGTCAGAGGTGAAAGTGGCATATCGCAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCACACGAGCTGTCTATGCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCACACGAGCTGTCTATGCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.133 | 0.124 | search_plus_done; http://172.18.8.135:50400/match?q=TCACACGAGCTGTCTATGCC&k=0&no_gap=0&offset=0&limit=50
0.597 | 0.464 | search_minus_done; http://172.18.8.135:50400/match?q=GGCATAGACAGCTCGTGTGA&k=0&no_gap=0&offset=0&limit=47
0.603 | 0.006 | cgi_end;

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