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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-19 04:39:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

17ACDHMS_UP_003_D09_28JAN2004_073 Brassica napus 17ACDHMS Brassica napus cDNA 5', mRNA sequence.
CN725895.1:340-359
AGTTCATCAAGCTCTAGCTCGGTGAGATTC340TCATGCGTCAATAATTCTTTTATAGCTTCTTTAGGTTAAGGAGAGTTGAT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB019I24, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC189251.2:91790-91809
AGTTCATCAAGCTCTAGCTCGGTGAGATTC91790TCATGCGTCAATAATTCTTTTATAGCTTCTTTAGGTTAAGGAGAGTTGAT
Brassica juncea dehydrin (DHN1) gene, complete cds.
AY130999.1:337-356
AGTTCATCAAGCTCTAGCTCGGTGAGATTC337TCATGCGTCAATAATTCTTTTATAGCTTCTTTAGGTTAAGGAGAGTTGAT
Brassica napus cultivar Xiang5A chromosome 4.
CP123879.1:64432367-64432386
AGTTCATCAAGCTCTAGCTCGGTGAGATTC64432367TCATGCGTCAATAATTCTTTTATAGCTTCTTTAGGTTAAGGAGAGTTGAT
Brassica napus genome assembly, chromosome: A09.
HG994363.1:48306783-48306802
AGTTCATCAAGCTCTAGCTCGGTGAGATTC48306783TCATGCGTCAATAATTCTTTTATAGCTTCTTTAGGTTAAGGAGAGTTGAT
Brassica rapa genome, scaffold: A09.
LR031568.1:52558957-52558976
AGTTCATCAAGCTCTAGCTCGGTGAGATTC52558957TCATGCGTCAATAATTCTTTTATAGCTTCTTTAGGTTAAGGAGAGTTGAT
Brassica rapa genome assembly, chromosome: A09.
LS974625.2:63082033-63082052
AGTTCATCAAGCTCTAGCTCGGTGAGATTC63082033TCATGCGTCAATAATTCTTTTATAGCTTCTTTAGGTTAAGGAGAGTTGAT
Halyzia sedecimguttata genome assembly, chromosome: 3.
OW569413.2:21170574-21170593
AAAAATTGAAAATTATCCATAAGCTGGGAT21170574AAAGAATTATTGACGCATGAAATTAAAGATCTCAGTTCTCGAATGTGCCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCATGCGTCAATAATTCTTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCATGCGTCAATAATTCTTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.133 | 0.124 | search_plus_done; http://172.18.8.135:50400/match?q=TCATGCGTCAATAATTCTTT&k=0&no_gap=0&offset=0&limit=50
0.150 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=AAAGAATTATTGACGCATGA&k=0&no_gap=0&offset=0&limit=43
0.150 | 0.001 | cgi_end;

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