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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-16 08:45:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Trifolium repens mRNA, clone: WCC05c16_057, unspecified EST.
FY455766.1:205-224
TACTCAATCTCCTTCTTCTTCTTCTCCATG205TCCATCTTCCACATCCACAACCATAACCACCACCACCACCACCACACCGA
Trifolium repens mRNA, clone: WCC23l07_014, unspecified EST.
FY462264.1:112-131
TACTCAATCTCCTTCTTCTTCTTCTCCATG112TCCATCTTCCACATCCACAACCATAACCACCACCACCACCACCACACCGA
Alisma plantago-aquatica genome assembly, chromosome: 1.
OY856409.1:179299344-179299363
TGTCTGCCATCCTCTTCTTTGAGAGGAGTT179299344TCCATCTTCCACATCCACAAAAGATATAGATCTGAAGAAGTATCATTGGT
Ypsolopha scabrella genome assembly, chromosome: 14.
OU342974.1:7533607-7533626
TGCTGCCAGCAAGTCGAGTACAAAATGGAC7533607TCCATCTTCCACATCCACAACAACCAGCACGTCAACCAGGCCTCCCACAA
Apoderus coryli genome assembly, chromosome: 1.
OU452198.1:26515325-26515344
GTACATAACATAAGGTTATTCTTAGCGTCG26515325TCCATCTTCCACATCCACAATTTATTAATGAAATTGTAAATAAAACGAAG
Apoderus coryli genome assembly, chromosome: 1.
OU452198.1:26521188-26521207
CATAATATGCAGAGGTTATTCTTAGCGTCA26521188TCCATCTTCCACATCCACAATTTATTAATGAAATTGTAAATAAAACGAAG
Apoderus coryli genome assembly, chromosome: 3.
OU452200.1:5330764-5330783
CATAATATGCAGAGGTTATTCTCAGCGTCG5330764TCCATCTTCCACATCCACAATTTATTAATGAAATTGTAAATAAAATGAAG
1446548_5_E02_011 PY06 Carica papaya cDNA, mRNA sequence.
EX266211.1:668-687
CAGAAGAGAACCTTGATGGGTCTTTCAGGT668TTGTGGATGTGGAAGATGGATTAAAGGGATTGGCTGTTGAGAGTGAGGGA
OG_BBa0028E12.f OG_BBa Oryza glaberrima genomic clone OG_BBa0028E12 5', genomic survey sequence.
CW676951.1:439-458
CACTAGATGGAGGAGGTGCTGCTCGACTGG439TTGTGGATGTGGAAGATGGAGAAGCAGTACGGCCGGCCGGAGGAGTGGTG
OB_ABa0046L13.r OB_ABa Oryza barthii genomic clone OB_ABa0046L13 3', genomic survey sequence.
KS483022.1:467-486
CACTAGATGGAGGAGGTGCTGCTCGACTGG467TTGTGGATGTGGAAGATGGAGAAGCAGTACGGCCGGCCGGAGGAGTGGTG
OB_ABa0063O02.f OB_ABa Oryza barthii genomic clone OB_ABa0063O02 5', genomic survey sequence.
KS495160.1:467-486
CACTAGATGGAGGAGGTGCTGCTCGACTGG467TTGTGGATGTGGAAGATGGAGAAGCAGTACGGCCGGCCGGAGGAGTGGTG
OB_ABa0090P15.f OB_ABa Oryza barthii genomic clone OB_ABa0090P15 5', genomic survey sequence.
KS514148.1:467-486
CACTAGATGGAGGAGGTGCTGCTCGACTGG467TTGTGGATGTGGAAGATGGAGAAGCAGTACGGCCGGCCGGAGGAGTGGTG
Trifolium repens isolate ACLI19 chromosome 08_Pall.
CP125851.1:42810124-42810143
TCGGTGTGGTGGTGGTGGTGGTGGTTATGG42810124TTGTGGATGTGGAAGATGGACATGGAGAAGAAGAAGAAGGAGATTGAGTA
Apoderus coryli genome assembly, chromosome: 3.
OU452200.1:37704895-37704914
AACTTCGTTTTATTTACAATCGTTAACAAA37704895TTGTGGATGTGGAAGATGGACAACGCTAAGAATAACCTCTGCATATTATG
Apoderus coryli genome assembly, chromosome: 10.
OU452207.1:17525962-17525981
GTAAATAAAATTTACAATTTCATTAATAAA17525962TTGTGGATGTGGAAGATGGACGACGCTAAGAATAACCTCTGCATATTATG
Apoderus coryli genome assembly, chromosome: 12.
OU452209.1:11785829-11785848
AACTTCGTTTTATTTACAATCGTTAATAAA11785829TTGTGGATGTGGAAGATGGACATCGCTAAGAATAGCCTCTGGATATGAAC
Apoderus coryli genome assembly, chromosome: 18.
OU452216.1:717607-717626
CATAACTTCGTTTTATTTACAATCAATGAA717607TTGTGGATGTGGAAGATGGACAACGCCAAGAATAACCTCTGCATATGAAC
Apoderus coryli genome assembly, chromosome: 18.
OU452216.1:995293-995312
AATTTCGTTTTATTTAAAATCATTAATGAA995293TTGTGGATGTGGAAGATGGACAACGCCAAGAAAAACCTCTGCATATGAAC
Apoderus coryli genome assembly, chromosome: 18.
OU452216.1:1536850-1536869
AATTTCGTTTTATTTAAAATCATTAATGAA1536850TTGTGGATGTGGAAGATGGACAACGCCAAGAAAAACCTCTGCATATGAAC
Eugnorisma glareosa genome assembly, chromosome: 7.
OX387964.1:4584380-4584399
CTGTGATCGTATCGGGATGGTTCGGTGTTT4584380TTGTGGATGTGGAAGATGGAAGAAACACAGAAGACGTAGCACGAGGAAGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCCATCTTCCACATCCACAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCATCTTCCACATCCACAA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.335 | 0.327 | search_plus_done; http://172.18.8.135:50400/match?q=TCCATCTTCCACATCCACAA&k=0&no_gap=0&offset=0&limit=50
0.717 | 0.381 | search_minus_done; http://172.18.8.135:50400/match?q=TTGTGGATGTGGAAGATGGA&k=0&no_gap=0&offset=0&limit=43
0.725 | 0.008 | cgi_end;

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