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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-17 18:57:32, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

RCRB916TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRB916, mRNA sequence.
EG687219.1:260-279
CCCACCGGCCGGTTACCCTGGCGGCCCCTC260TGCTCCACACCATTCAGGTACTATTACCATAATGTTCTTTGATCGGGAGA
Citrullus lanatus cultivar Allsugar chromosome 7.
CP155015.1:25391893-25391912
TTATCCTCCTGGTGCATATCCTGGACCCTC25391893TGCTCCACACCATTCAGGTATTGATCCAATTTTACATACATCAGTATGAA
Citrullus lanatus cultivar Charleston Gray chromosome 7.
CP155148.1:25441495-25441514
TTATCCTCCTGGTGCATATCCTGGACCCTC25441495TGCTCCACACCATTCAGGTATTGATCCAATTTTACATACATCAGTATGAA
Citrullus lanatus cultivar Calhoun Gray chromosome 7.
CP155159.1:25449321-25449340
TTATCCTCCTGGTGCATATCCTGGACCCTC25449321TGCTCCACACCATTCAGGTATTGATCCAATTTTACATACATCAGTATGAA
Citrullus lanatus cultivar PKR6 chromosome 7.
CP155170.1:25824562-25824581
TTATCCTCCTGGTGCATATCCTGGACCCTC25824562TGCTCCACACCATTCAGGTATTGATCCAATTTTACATACATCAGTATGAA
Citrullus lanatus cultivar Sugarlee chromosome 7.
CP155181.1:25438174-25438193
TTATCCTCCTGGTGCATATCCTGGACCCTC25438174TGCTCCACACCATTCAGGTATTGATCCAATTTTACATACATCAGTATGAA
Citrullus lanatus cultivar ShiHongNo2 chromosome 7.
CP155192.1:25403770-25403789
TTATCCTCCTGGTGCATATCCTGGACCCTC25403770TGCTCCACACCATTCAGGTATTGATCCAATTTTACATACATCAGTATGAA
Citrullus lanatus cultivar PI 288522 chromosome 7.
CP155203.1:25655904-25655923
TTATCCTCCTGGTGCATATCCTGGACCCTC25655904TGCTCCACACCATTCAGGTATTGATCCAATTTTACATACATCAGTATGAA
Citrullus lanatus cultivar DaBanHongZiGua chromosome 7.
CP155214.1:25855591-25855610
TTATCCTCCTGGTGCATATCCTGGACCCTC25855591TGCTCCACACCATTCAGGTATTGATCCAATTTTACATACATCAGTATGAA
Citrullus lanatus cultivar PI 381740 chromosome 7.
CP155225.1:25729646-25729665
TTATCCTCCTGGTGCATATCCTGGACCCTC25729646TGCTCCACACCATTCAGGTATTGATCCAATTTTACATACATCAGTATGAA
Citrullus lanatus cultivar SanBaiGua chromosome 7.
CP155236.1:25787551-25787570
TTATCCTCCTGGTGCATATCCTGGACCCTC25787551TGCTCCACACCATTCAGGTATTGATCCAATTTTACATACATCAGTATGAA
Citrullus lanatus cultivar PI 254622 chromosome 7.
CP155247.1:25204222-25204241
TTATCCTCCTGGTGCATATCCTGGACCCTC25204222TGCTCCACACCATTCAGGTATTGATCCAATTTTACATACATCAGTATGAA
Citrullus lanatus cultivar HeiShanRen chromosome 7.
CP155258.1:25391893-25391912
TTATCCTCCTGGTGCATATCCTGGACCCTC25391893TGCTCCACACCATTCAGGTATTGATCCAATTTTACATACATCAGTATGAA
Citrullus lanatus subsp. mucosospermus cultivar PI 595203 chromosome 7.
CP155313.1:25947995-25948014
TTATCCTCCTGGTGCATATCCTGGACCCTC25947995TGCTCCACACCATTCAGGTATTGATCCAATTTTACATACATCAGTATGAA
Citrullus lanatus subsp. mucosospermus cultivar PI 532732 chromosome 7.
CP155335.1:25650628-25650647
TTATCCTCCTGGTGCATATCCTGGACCCTC25650628TGCTCCACACCATTCAGGTATTGATCCAATTTTACATACATCAGTATGAA
Citrullus colocynthis cultivar PI 537300 chromosome 7.
CP155346.1:26489357-26489376
TTATCCTCCTGGTGCATATCCTGGACCCTC26489357TGCTCCACACCATTCAGGTATTGATCCAATTTTACATACATCAGTACGAA
Citrullus colocynthis cultivar PI 525081 chromosome 7.
CP155357.1:25694008-25694027
TTATCCTCCTGGTGCATATCCTGGACCCTC25694008TGCTCCACACCATTCAGGTATTGATCCAATTTTACATACATCAGTACGAA
Citrullus naudinianus cultivar PI 596694M chromosome 7.
CP155368.1:24085774-24085793
TTATCCTCCTGGTGCATATCCTGGGCCCTC24085774TGCTCCACACCATTCAGGTATTGATCCAATTTTACATACATCAGTAGGAA
Citrullus colocynthis cultivar PI 652554 chromosome 7.
CP155379.1:24526790-24526809
TTATCCTCCTGGTGCATATCCTGGACCCTC24526790TGCTCCACACCATTCAGGTATTGATCCAATTTTACATACATCAGTACGAA
Citrullus colocynthis cultivar PI 632755 chromosome 7.
CP155390.1:25661678-25661697
TTATCCTCCTGGTGCATATCCTGGACCCTC25661678TGCTCCACACCATTCAGGTATTGATCCAATTTTACATACATCAGTACGAA
Citrullus rehmii cultivar PI 670011 chromosome 7.
CP155401.1:29894831-29894850
TTATCCTCCTGGTGCATATCCTGGACCCTC29894831TGCTCCACACCATTCAGGTATTGATCCAATTTTACATACATCAGTATGAA
Citrullus ecirrhosus cultivar PI 673135 chromosome 7.
CP155412.1:27525161-27525180
TTATCCTCCTGGTGCATATCCTGGACCCTC27525161TGCTCCACACCATTCAGGTATTGATCCAATTTTACATACATCAGTATGAA
Citrullus colocynthis genome assembly, chromosome: 6.
OZ021740.1:24779634-24779653
TTATCCTCCTGGTGCATATCCTGGACCCTC24779634TGCTCCACACCATTCAGGTATTAATCCAATTTTACATACATCAGTACGAA
Octopus vulgaris genome assembly, chromosome: 2.
OX597815.1:172386458-172386477
TGTCCTTGAGCAAGACACTTTATTTCACAT172386458TGCTCCACACCATTCAGGTACCAAAAGTCAGTAGTACACATATTTCAAAG
Dromius quadrimaculatus genome assembly, chromosome: 1.
OZ022324.1:60022070-60022089
TATTCTGAAATTTGAAAGTACTGCCTGCGC60022070TGCTCCACACCATTCAGGTAGAGAAATTATCAATAAGGATGAAGATGGAA
Dromius quadrimaculatus genome assembly, chromosome: 5.
OZ022328.1:9826016-9826035
ATTTTGAAAATTTGAAAGTACTGCCTGCGC9826016TGCTCCACACCATTCAGGTAGACCCAGAAGTAGAAAAAAATGCTCCAGCC
Nesoenas mayeri genome assembly, chromosome: 14.
OY720071.1:7782582-7782601
CAGAGGCAGCAGTGGGGAGGGAACTACCTT7782582TGCTCCACACCATTCAGGTATTGATTATAGCTCGAACATCACTCGGAACT
RCRDB65TO Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRDB65, mRNA sequence.
EG675579.1:711-730
TCTCCCGATCAAAGAACATTATGGTAATAG711TACCTGAATGGTGTGGAGCAGAGGGGCCGCCAGGGTAACCGGCCGGTGGG
RCRAE68TO Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRAE68, mRNA sequence.
EG680571.1:601-620
TCTCCCGATCAAAGAACATTATGGTAATAG601TACCTGAATGGTGTGGAGCAGAGGGGCCGCCAGGGTAACCGGCCGGTGGG
RCRE606TO Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRE606, mRNA sequence.
EG680947.1:675-694
TCTCCCGATCAAAGAACATTATGGTAATAG675TACCTGAATGGTGTGGAGCAGAGGGGCCGCCAGGGTAACCGGCCGGTGGG
RCRB916TO Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRB916, mRNA sequence.
EG687216.1:697-716
TCTCCCGATCAAAGAACATTATGGTAATAG697TACCTGAATGGTGTGGAGCAGAGGGGCCGCCAGGGTAACCGGCCGGTGGG
RCRBI67TO Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRBI67, mRNA sequence.
EG688890.1:704-723
TCTCCCGATCAAAGAACATTATGGTAATAG704TACCTGAATGGTGTGGAGCAGAGGGGCCGCCAGGGTAACCGGCCGGTGGG
Khaya senegalensis isolate HCNGB_00002341 chromosome 8.
CP135557.1:2001003-2001022
TTCAACATCATTTGCTTTTTCAAAAATTTA2001003TACCTGAATGGTGTGGAGCAGATGGGCCAGCATGACCAGCTGGTGGGTAC
Cucumis melo isolate PI 511890 chromosome 7.
CP136106.1:21309230-21309249
TTCCTACTGATGTATGTAAACTTGGATCAA21309230TACCTGAATGGTGTGGAGCAGAGGGTCCAGGATAAGCACCAGGAGGATAT
Citrullus amarus cultivar PI 296341-FR chromosome 7.
CP155269.1:29640231-29640250
TTCATACTGATGTATGTAAAATTGGATCAA29640231TACCTGAATGGTGTGGAGCAGAGGGTCCAGGATATGCACCAGGAGGATAA
Citrullus amarus cultivar PI 189225 chromosome 7.
CP155280.1:29507017-29507036
TTCATACTGATGTATGTAAAATTGGATCAA29507017TACCTGAATGGTGTGGAGCAGAGGGTCCAGGATATGCACCAGGAGGATAA
Citrullus amarus cultivar RCAT 055816 chromosome 7.
CP155291.1:29862126-29862145
TTCATACTGATGTATGTAAAATTGGATCAA29862126TACCTGAATGGTGTGGAGCAGAGGGTCCAGGATATGCACCAGGAGGATAA
Citrullus amarus cultivar PI 271769 chromosome 7.
CP155302.1:28974040-28974059
TTCATACTGATGTATGTAAAATTGGATCAA28974040TACCTGAATGGTGTGGAGCAGAGGGTCCAGGATATGCACCAGGAGGATAA
Citrullus amarus cultivar PI 482276 chromosome 7.
CP155324.1:29092215-29092234
TTCATACTGATGTATGTAAAATTGGATCAA29092215TACCTGAATGGTGTGGAGCAGAGGGTCCAGGATATGCACCAGGAGGATAA
Cucumis melo genomic scaffold, anchoredscaffold00027.
LN681873.1:2539510-2539529
TTCCTACTGATGTATGTAAACTTGGATCAA2539510TACCTGAATGGTGTGGAGCAGAGGGTCCAGGATAAGCACCAGGAGGATAT
Cucumis melo genomic chromosome, chr_7.
LN713261.1:20822589-20822608
TTCCTACTGATGTATGTAAACTTGGATCAA20822589TACCTGAATGGTGTGGAGCAGAGGGTCCAGGATAAGCACCAGGAGGATAT
Dromius quadrimaculatus genome assembly, chromosome: 2.
OZ022325.1:45050099-45050118
TTCCATTTTCATCCCTATTGATAATTTCTC45050099TACCTGAATGGTGTGGAGCAGCGTAGGAAATATTTTCAAAATTCAGAATA
Dromius quadrimaculatus genome assembly, chromosome: 8.
OZ022331.1:10661125-10661144
TGCATTTCCATCTTCTATTGATAATTCCTC10661125TACCTGAATGGTGTGGAGCAGAGCAGGCAGTACTTTCAAATTTCTGAATA
Dromius quadrimaculatus genome assembly, chromosome: 11.
OZ022334.1:10879715-10879734
CATCTTTATCGTTATTGATTATTATTTCTC10879715TACCTGAATGGTGTGGAGCAGCGCAGACAGTACTTTCAAATTTTAGAATC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGCTCCACACCATTCAGGTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCTCCACACCATTCAGGTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.423 | 0.414 | search_plus_done; http://172.18.8.135:50800/match?q=TGCTCCACACCATTCAGGTA&k=0&no_gap=0&offset=0&limit=50
0.861 | 0.438 | search_minus_done; http://172.18.8.135:50800/match?q=TACCTGAATGGTGTGGAGCA&k=0&no_gap=0&offset=0&limit=23
0.873 | 0.012 | cgi_end;

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