GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-13 15:02:17, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

KS17060G07 KS17 Capsicum annuum cDNA, mRNA sequence.
GD081161.1:518-539
ACACATGTTCAATTGAATAGGTGTTCGGTT518TGTAGAAAGAAGGTGGGATTAGTCGGGTTCAAATGTAGATGTGGAACCACTT
KS20064C01 KS20 Capsicum annuum cDNA, mRNA sequence.
GD099184.1:576-597
ACACATGTTCAATTGAATAGGTGTTCGGTT576TGTAGAAAGAAGGTGGGATTAGTCGGGTTCAAATGTAGATGTGGAACCACTT
TSA: Capsicum annuum MGMT_Contig39417 mRNA sequence.
JW089661.1:317-338
AAGTGGTTCCACATCTACATTTGAACCCGA317CTAATCCCACCTTCTTTCTACAAACCGAACACCTATTCAATTGAACATGTGT
TSA: Capsicum annuum EJ_MegaContig_438, mRNA sequence.
JW128718.1:307-328
AAGTGGTTCCACATCTACATTTGAACCCGA307CTAATCCCACCTTCTTTCTACAAACCGAACACCTATTCAATTGAACATGTGT
Capsicum annuum Takanotsume DNA, chromosome 10, sequence.
AP026705.1:226732273-226732294
AAGTGGTTCCACATCTACATTTGAACCCGA226732273CTAATCCCACCTTCTTTCTACAAACCGAACACCTATTCAATTGAACATGTGT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:231530393-231530414
AAGTGGTTCCACATCTACATTTGAACCCGA231530393CTAATCCCACCTTCTTTCTACAAACCGAACACCTATTCAATTGAACATGTGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGTAGAAAGAAGGTGGGATTAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTAGAAAGAAGGTGGGATTAG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.242 | 0.233 | search_plus_done; http://172.18.8.135:50400/match?q=TGTAGAAAGAAGGTGGGATTAG&k=0&no_gap=0&offset=0&limit=50
0.302 | 0.060 | search_minus_done; http://172.18.8.135:50400/match?q=CTAATCCCACCTTCTTTCTACA&k=0&no_gap=0&offset=0&limit=48
0.305 | 0.003 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).