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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-16 14:33:43, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

VMC8D11 VMC library Vitis vinifera STS genomic, sequence tagged site.
BV722709.1:3-24
AC3TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGAGAGT
Vitis vinifera cultivar Pinot Noir 40024 chromosome 7.
CP126654.1:23096438-23096459
ACCATGCATCTTGGATTGAAGAAAGAGTAC23096438TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGATGGA
Vitis x doaniana cultivar PI 588149 chromosome 7.
CP128333.1:23637771-23637792
ACCATGCATCTTGGATTGAAGAAAGAGTAC23637771TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGAGATG
Vitis x doaniana cultivar PI 588149 chromosome 7.
CP128352.1:24296670-24296691
ACCATGCATCTTGGATTGAAGAAAGAGTAC24296670TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGATGGAAGTTAG
Vitis vinifera cultivar Black Monukka isolate seedless chromosome 07.
CP140991.1:21469790-21469811
ACCATGCATCTTGGATTGAAGAAAGAGTAC21469790TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGATGGA
Vitis vinifera cultivar Black Monukka isolate seedless chromosome 07.
CP141010.1:21606679-21606700
ACCATGCATCTTGGATTGAAGAAAGAGTAC21606679TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGAGATG
Vitis vinifera cultivar Thompson Seedless isolate seedless chromosome 07.
CP142471.2:22421410-22421431
ACCATGCATCTTGGATTGAAGAAAGAGTAC22421410TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGATGGA
Vitis vinifera cultivar Thompson Seedless isolate seedless chromosome 07.
CP142490.2:21464358-21464379
ACCATGCATCTTGGATTGAAGAAAGAGTAC21464358TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGATGGA
Vitis retordii isolate mmpt chromosome 7.
CP149593.1:26369200-26369221
ACCATGCATCTTGGATTGAAGAAAGAGTAC26369200TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGATGGAAGTT
Vitis retordii isolate mmpt chromosome 7.
CP149612.1:24570305-24570326
ACCATGCATCTTGGATTGAAGAAAGAGTAC24570305TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGATGGAAGTT
Vitis vinifera x Vitis labrusca cultivar Shine Muscat chromosome 07.
CP161580.1:21834794-21834815
ACCATGCATCTTGGATTGAAGAAAGAGTAC21834794TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGAGAGA
Vitis vinifera x Vitis labrusca cultivar Shine Muscat chromosome 07.
CP161599.1:23170929-23170950
ACCATGCATCTTGGATTGAAGAAAGAGTAC23170929TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGAGATG
Vitis vinifera cultivar Pinot Noir chromosome 07.
CP161618.1:24028930-24028951
ACCATGCATCTTGGATTGAAGAAAGAGTAC24028930TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGATGGA
Vitis vinifera cultivar Pinot Noir chromosome 07.
CP161637.1:23097166-23097187
ACCATGCATCTTGGATTGAAGAAAGAGTAC23097166TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGAGAGA
Vitis vinifera cultivar Muscat Hamburg chromosome 07.
CP161656.1:22186213-22186234
ACCATGCATCTTGGATTGAAGAAAGAGTAC22186213TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGAGATG
Vitis vinifera cultivar Muscat Hamburg chromosome 07.
CP161675.1:23003900-23003921
ACCATGCATCTTGGATTGAAGAAAGAGTAC23003900TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGAGAGA
Vitis vinifera cultivar Manicure Finger chromosome 07.
CP161694.1:23010119-23010140
ACCATGCATCTTGGATTGAAGAAAGAGTAC23010119TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGATGGA
Vitis vinifera cultivar Manicure Finger chromosome 07.
CP161713.1:21925373-21925394
ACCATGCATCTTGGATTGAAGAAAGAGTAC21925373TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGAGAGA
Vitis vinifera cultivar Hongmunage chromosome 07.
CP161732.1:26466000-26466021
ACCATGCATCTTGGATTGAAGAAAGAGTAC26466000TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGATGGA
Vitis vinifera cultivar Hongmunage chromosome 07.
CP161751.1:22804624-22804645
ACCATGCATCTTGGATTGAAGAAAGAGTAC22804624TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGATGGA
Vitis vinifera cultivar Baimunage chromosome 07.
CP161770.1:22162457-22162478
ACCATGCATCTTGGATTGAAGAAAGAGTAC22162457TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGATGGA
Vitis vinifera cultivar Baimunage chromosome 07.
CP161789.1:22709385-22709406
ACCATGCATCTTGGATTGAAGAAAGAGTAC22709385TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGATGGA
Vitis vinifera genome assembly, chromosome: 7.
OZ210965.1:23509454-23509475
ACCATGCATCTTGGATTGAAGAAAGAGTAC23509454TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGAGAGA
Vitis vinifera genome assembly, chromosome: 07.
OZ210984.1:24102087-24102108
ACCATGCATCTTGGATTGAAGAAAGAGTAC24102087TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGATGGA
Vitis pseudoreticulata genome assembly, chromosome: 07.
OZ211427.1:25265469-25265490
ACCATGCATCTTGGATTGAAGAAAGAGTAC25265469TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGATGGAAGTT
Vitis cinerea var. helleri x Vitis riparia genome assembly, chromosome: 07.
OZ211446.1:23055745-23055766
ACCATGCATCTTGGATTGAAGAAAGAGTAC23055745TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGAGAGA
Vitis vinifera genome assembly, chromosome: 07.
OZ211465.1:23089593-23089614
ACCATGCATCTTGGATTGAAGAAAGAGTAC23089593TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGAGAGA
Vitis pseudoreticulata genome assembly, chromosome: 07.
OZ211504.1:25230154-25230175
ACCATGCATCTTGGATTGAAGAAAGAGTAC25230154TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGAGAGA
Vitis cinerea var. helleri x Vitis vinifera genome assembly, chromosome: 07.
OZ211522.1:22229305-22229326
ACCATGCATCTTGGATTGAAGAAAGAGTAC22229305TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGAGAGA
Vitis cinerea var. helleri x Vitis vinifera genome assembly, chromosome: 07.
OZ211542.1:22731095-22731116
ACCATGCATCTTGGATTGAAGAAAGAGTAC22731095TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGATGGA
Vitis vinifera genome assembly, chromosome: 07.
OZ211561.1:23992636-23992657
ACCATGCATCTTGGATTGAAGAAAGAGTAC23992636TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGAGAGAGATGGA
Vitis cinerea var. helleri x Vitis riparia genome assembly, chromosome: 07.
OZ211580.1:24288574-24288595
ACCATGCATCTTGGATTGAAGAAAGAGTAC24288574TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGATGGAAGTTAG
Vitis cinerea var. helleri x Vitis riparia genome assembly, chromosome: 07.
OZ211599.1:24732027-24732048
ACCATGCATCTTGGATTGAAGAAAGAGTAC24732027TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGATGGAAGTTAG
Vitis cinerea var. helleri x Vitis riparia genome assembly, chromosome: 07.
OZ211650.1:24217067-24217088
ACCATGCATCTTGGATTGAAGAAAGAGTAC24217067TGTTGAAGCTAGCATTGTCTCCTCAACAAAGAGAGAGAGAGATGGAAGTTAG
Vitis vinifera, whole genome shotgun sequence, contig VV78X098781.4, clone ENTAV 115.
AM470837.1:32154-32175
TCTCTCTCTCTCTCTCTCTCTCTTTGTTGA32154GGAGACAATGCTAGCTTCAACAGTACTCTTTCTTCAATCCAAGATGCATGGT
Vitis vinifera cv. PN40024, annotated scaffold_500.assembly12x.
FN596294.1:482-503
TCTCTCTCTCTCTCTCTCTCTCTTTGTTGA482GGAGACAATGCTAGCTTCAACAGTACTCTTTCTTCAATCCAAGATGCATGGT
Vitis vinifera cv. PN40024, annotated scaffold_304.assembly12x.
FN596780.1:110721-110742
TCCATCTCTCTCTCTCTCTCTCTTTGTTGA110721GGAGACAATGCTAGCTTCAACAGTACTCTTTCTTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGTTGAAGCTAGCATTGTCTCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTTGAAGCTAGCATTGTCTCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.350 | 0.342 | search_plus_done; http://172.18.8.135:50800/match?q=TGTTGAAGCTAGCATTGTCTCC&k=0&no_gap=0&offset=0&limit=50
0.516 | 0.165 | search_minus_done; http://172.18.8.135:50800/match?q=GGAGACAATGCTAGCTTCAACA&k=0&no_gap=0&offset=0&limit=16
0.518 | 0.002 | cgi_end;

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