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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-07 11:59:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB048K11, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces.
AC189374.2:54959-54978
TATTAATGTTTCTAGCTAATTCTAGAAAGC54959TTCCCGGAAAGTCTTCTTGGTAAGTTTTTGTAAAACTTAATTGTATTCTC
Sepiola atlantica genome assembly, chromosome: 4.
OY744518.1:117543809-117543828
GGCGTTATATCGATAAAAAAACCCGGAGCA117543809TTCCCGGAAAGTCTTCTTGGAAAAATATTGGTTGGGAATTAACTGAGTTT
Brassica napus genome assembly, chromosome: A01.
HG994355.1:21923684-21923703
GAGAATACAATTAAGTTTTACAAAAACTTA21923684CCAAGAAGACTTTCCGGGAAGCTTTCTAGAATTAGCTAGAAACATTAATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCCCGGAAAGTCTTCTTGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCCCGGAAAGTCTTCTTGG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.108 | 0.099 | search_plus_done; http://172.18.8.135:50400/match?q=TTCCCGGAAAGTCTTCTTGG&k=0&no_gap=0&offset=0&limit=50
0.136 | 0.028 | search_minus_done; http://172.18.8.135:50400/match?q=CCAAGAAGACTTTCCGGGAA&k=0&no_gap=0&offset=0&limit=48
0.137 | 0.001 | cgi_end;

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