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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-15 23:12:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Trifolium repens mRNA, clone: WCC05p17_080, unspecified EST.
FY456056.1:170-190
CATTATCAATGAACAAATCTGCTATGATCT170TTCTCACCTCATCACCACAGATTACACCATCTTTTATACCATTATTGGTTT
Trifolium dubium genome assembly, chromosome: 15.
OX638076.1:3269224-3269244
CATTATCGATGAACAAATCTGCTATGATCT3269224TTCTCACCTCATCACCACAGATTACACCATCTTTTATGCCATTGGTTTTAT
Trifolium fragiferum genome assembly, chromosome: 6.
OX940794.1:43046416-43046436
CATTATCAATGAACAAATCTGTTATGATCT43046416TTCTCACCTCATCACCACAGATTACACCATCTTTTATGTCATTATTGGTTT
Trifolium repens isolate ACLI19 chromosome 03_Pall.
CP125841.1:55572233-55572253
AAACCAATAATGGTATAAAAGATGGTGTAA55572233TCTGTGGTGATGAGGTGAGAAAGATCATAGCAGATTTGTTCATTGATAATG
Trifolium subterraneum genome assembly, chromosome: 8.
OX637468.1:50444022-50444042
ATAAAACCAATGACATAAAAGATGGTGTAA50444022TCTGTGGTGATGAGGTGAGAAAGATCATAGCAGATTTGTTCATTGATAATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCTCACCTCATCACCACAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCTCACCTCATCACCACAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.199 | 0.190 | search_plus_done; http://172.18.8.135:50400/match?q=TTCTCACCTCATCACCACAGA&k=0&no_gap=0&offset=0&limit=50
0.216 | 0.017 | search_minus_done; http://172.18.8.135:50400/match?q=TCTGTGGTGATGAGGTGAGAA&k=0&no_gap=0&offset=0&limit=47
0.218 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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