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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-12-16 03:04:07, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Lutzomyia longipalpis EST clone NSFM-53e08, sequence read NSFM-53e08.p1k.
AM102053.1:679-698
GCCTTGGTAGCGAGCTGCTTACGAGGAGCC679TTTCCTCCGGTTGACTTACGAGCGGTCTGCTTTGTACGGGCCATGATTTA
Lutzomyia longipalpis EST clone NSFM-68f02, sequence read NSFM-68f02.p1k.
AM107662.1:664-683
GCCTTGGTAGCGAGCTGCTTACGAGGAGCC664TTTCCTCCGGTTGACTTACGAGCGGTCTGCTTTGTACGGGCCATGATTTA
Lutzomyia longipalpis EST clone NSFM-38b08, sequence read NSFM-38b08.p1k.
AM107664.1:666-685
GCCTTGGTAGCGAGCTGCTTACGAGGAGCC666TTTCCTCCGGTTGACTTACGAGCGGTCTGCTTTGTACGGGCCATGATTTA
Lutzomyia longipalpis EST clone NSFM-141h09, sequence read NSFM-141h09.p1k.
AM107667.1:662-681
GCCTTGGTAGCGAGTTGCTTACGCGGAGCC662TTTCCTCCGGTTGACTTACGAGCGGTCTGCTTTGTACGGGCCATGATTTA
Lutzomyia longipalpis EST clone NSFM-116e04, sequence read NSFM-116e04.p1k.
AM107670.1:674-693
GCCTTGGTAGCGAGCTGCTTACGAGGAGCC674TTTCCTCCGGTTGACTTACGAGCGGTCTGCTTTGTACTGGCCATGATTTA
Lutzomyia longipalpis EST clone NSFM-64h10, sequence read NSFM-64h10.p1k.
AM107673.1:664-683
GCCTTGGTAGCGAGCTGCTTACGAGGAGCC664TTTCCTCCGGTTGACTTACGAGCGGTCTGCTTTGTACGGGGCATGATTTA
21-1 Stevia field grown leaf cDNA Stevia rebaudiana cDNA 5', mRNA sequence.
BG522402.1:561-580
CCTTGGNGGCAAGTTGTTTCCTTGGGGGCC561TTTCCTCCGGTTGACTTACGGGCAGTTTGGTTGGTNCCCCCATCTCGAGA
UCRCR01_02B01_f Clementine Mandarin Albedo at Rind Separation cDNA Library Citrus reticulata cDNA clone CR_CEa02B01, mRNA sequence.
CF828748.1:645-664
GCCTTGGTAGCAAGTTGCTTCCTAGGAGCC645TTTCCTCCGGTTGACTTACGTGCAGTTTGCTTGGTACGGGCCATCTCTGA
UCRCS02_02J24_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02J24, mRNA sequence.
CF832891.1:764-783
GCCTTGGTAGCAAGTTGCTTCCTAGGAGCC764TTTCCTCCGGTTGACTTACGTGCAGTTTGCTTGGTACGGGCCATCTCTGA
UCRCS03_03J12_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa03J12, mRNA sequence.
CF836797.1:696-715
GCCTTGGTAGCAAGTTGCTTCCTAGGAGCC696TTTCCTCCGGTTGACTTACGTGCAGTTTGCTTGGTACGGGCCATCTCTGA
UCRCS03_03P05_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa03P05, mRNA sequence.
CF837002.1:757-776
GCCTTGGTAGCAAGTTGCTTCCTAGGAGCC757TTTCCTCCGGTTGACTTACGTGCAGTTTGCTTGGTACGGGCCATCTCTGA
UCRCS06_0004C21_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0004C21, mRNA sequence.
CN190869.1:681-700
GCCTTGGTAGCAAGTTGCTTCCTAGGAGCC681TTTCCTCCGGTTGACTTACGTGCAGTTTGCTTGGTACGGGCCATCTCTGA
UCRCS04_2_003A05_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T7_A05, mRNA sequence.
CV884371.1:644-663
GCCTTGGTAGCAAGTTGCTTCCTAGGAGCC644TTTCCTCCGGTTGACTTACGTGCAGTTTGCTTGGTACGGGCCATCTCTGA
UCRCS07_4A09_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-4A09-A18-1-6.g, mRNA sequence.
CX045796.1:677-696
GCCTTGGTAGCAAGTTGCTTCCTAGGAGCC677TTTCCTCCGGTTGACTTACGTGCAGTTTGCTTGGTACGGGCCATCTCTGA
UCRCS08_17B04_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17B04-C7-1-5.g, mRNA sequence.
CX070491.1:697-716
GCCTTGGTAGCAAGTTGCTTCCTAGGAGCC697TTTCCTCCGGTTGACTTACGTGCAGTTTGCTTGGTACGGGCCATCTCTGA
UCRCS08_64E10_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-64E10-I20-1-5.g, mRNA sequence.
CX675748.1:695-714
GCCTTGGTAGCAAGTTGCTTCCTAGGAGCC695TTTCCTCCGGTTGACTTACGTGCAGTTTGCTTGGTACGGGCCATCTCTGA
Citrus sinensis mRNA, clone: EIC0506, 5'-end sequence, expressed in embryonic induction callus.
DC887530.1:724-743
GCCTTGGTAGCAAGTTGCTTCCTAGGAGCC724TTTCCTCCGGTTGACTTACGTGCAGTTTGCTTGGTACGGGCCATCTCTGA
Citrus unshiu mRNA, clone: YJS1664, 5'-end sequence, expressed in juice sac.
DC901329.1:739-758
GCCTTGGTAGCAAGTTGCTTCCTANGAGCC739TTTCCTCCGGTTGACTTACGTGCAGTTTGCTTGGTACGGG
UCRCA01_01A04_f Bark of Madame Vinous Sweet Orange Scion on Standard Sour Orange Rootstock, Citrus Tristeza Virus Challenged - UCRCA01 Citrus aurantium cDNA clone CA_SEa0001A04, mRNA sequence.
DN621655.1:658-677
GCCTTGGTAGCAAGTTGCTTCCTAGGAGCC658TTTCCTCCGGTTGACTTACGTGCAGTTTGCTTGGTACGGGCCATCTCTGA
UCRCA01_02E12_f Bark of Madame Vinous Sweet Orange Scion on Standard Sour Orange Rootstock, Citrus Tristeza Virus Challenged - UCRCA01 Citrus aurantium cDNA clone CA_SEa0002E12, mRNA sequence.
DN622560.1:685-704
GCCTTGGTAGCAAGTTGCTTCCTAGGAGCC685TTTCCTCCGGTTGACTTACGTGCAGT
UCRCA01_02M05_r Bark of Madame Vinous Sweet Orange Scion on Standard Sour Orange Rootstock, Citrus Tristeza Virus Challenged - UCRCA01 Citrus aurantium cDNA clone CA_SEa0002M05, mRNA sequence.
DN622908.1:683-702
GCCTTGGTAGCAAGTTGCTTCCTAGGAGCC683TTTCCTCCGGTTGACTTACGTGCAGTTTGCTTGGTACGGGCCATCTCTGA
Ailanthus altissima genome assembly, chromosome: 24.
OX327706.1:16219917-16219936
ACCTTGGTGGCGAGTTGCTTTCTAGGAGCC16219917TTTCCTCCGGTTGACTTACGGGCAGTCTGCTTGGTACGGGCCATCTGTTC
Citrus sinensis genome assembly, chromosome: 4.
OY754321.1:24540853-24540872
ACCTTGGTAGCAAGTTGCTTCCTAGGAGCC24540853TTTCCTCCGGTTGACTTACGTGCAGTTTGCTTGGTACGGGCCATCTGTAC
Hypericum pulchrum genome assembly, chromosome: 7.
OZ066716.1:31053089-31053108
ACCTTGGTAGCGAGCTGCTTCCTTGGAGCC31053089TTTCCTCCGGTTGACTTACGAGCAGTTTGCTTGGTACGGGCCATCTAAAA
Veronica triphyllos genome assembly, chromosome: 1.
OZ076749.1:77439267-77439286
GCTTTCGTTGCGAGCTGCTTTCGGGGTGCC77439267TTTCCTCCGGTTGACTTACGGGCTGTTTGCTTTGTTCTTGCCATCGGGAA
Acaena ovalifolia genome assembly, chromosome: 1.
OZ078268.1:26062571-26062590
ACCTTAGTGGCAAGCTGCTTCCTCGGAGCC26062571TTTCCTCCGGTTGACTTACGAGCAGTTTGCTTAGTACGGGCCATCTGAAA
Acaena ovalifolia genome assembly, chromosome: 1.
OZ078291.1:25983716-25983735
ACCTTAGTGGCAAGCTGCTTCCTCGGAGCC25983716TTTCCTCCGGTTGACTTACGAGCAGTTTGCTTAGTACGGGCCATCTGAAA
Filipendula ulmaria genome assembly, chromosome: 1.
OZ121597.1:37705120-37705139
ACCTTGGTAGCGAGCTGCTTCCTCGGAGCC37705120TTTCCTCCGGTTGACTTACGAGCAGTTTGCTTGGTACGGGCCATCTGAAA
Poa chaixii genome assembly, chromosome: 3.
OZ173742.1:28609502-28609521
TAGAAAGCTCTAAGGTGCTTCGTAGGAGCC28609502TTTCCTCCGGTTGACTTACGAGCTGTACACTTAGTTCGAGCCATCCTGAA
Omalotheca supina genome assembly, chromosome: 8.
OZ182154.1:1103953-1103972
ACCTTAGTTGCAAGCTGTTTCCTGGGAGCC1103953TTTCCTCCGGTTGACTTACGAGCAGTTTGCTTGGTACGTGCCATCTACAA
Lutzomyia longipalpis isolate SR_M1_2022 chromosome 3.
CP101404.1:25307375-25307394
GCCTTGGTAGCGAGCTGCTTACGCGGAGCC25307375TTTCCTCCGGTTGACTTACGAGCGGTCTGCTTTGTACGGGCCATGATTTA
Strongyloides venezuelensis genome assembly, scaffold: SVE_scaffold0000007.
LM524975.1:474894-474913
GCTTTGGTAGCCAATTGTTTACGTGGAGCC474894TTTCCTCCGGTTGACTTACGGGCTGTTTGCTTAGTACGAGCCATAGTAAA
Lineus longissimus genome assembly, chromosome: 6.
OU342997.1:5746379-5746398
GCCTTGGTGGCCAATTGTTTCCTCGGGGCT5746379TTTCCTCCGGTTGACTTACGAGCGTCTGCTTGGGTCTTGCCATCTTTACA
Lineus longissimus genome assembly, chromosome: 6.
OU342997.1:5834931-5834950
GCCTTGGTAGCCAATTGTTTCCTCGGGGCT5834931TTTCCTCCGGTTGACTTACGAGCGGTCTGCTTGGTTGGCTGCCTGTCAAG
Lineus longissimus genome assembly, chromosome: 6.
OU342997.1:5943724-5943743
GCCTTGGTGGCCAATTGTTTCCTCGGGGCT5943724TTTCCTCCGGTTGACTTACGAGCGGTCTGCTTGGTTCTTGCCATCTTTAC
Lineus longissimus genome assembly, chromosome: 6.
OU342997.1:5977299-5977318
GCCTTGGTGGCCAATTGTTTCCTCGGGGCT5977299TTTCCTCCGGTTGACTTACGAGCGGTCTGCTTGGTTCTTGCCATCTTTAC
Lineus longissimus genome assembly, chromosome: 6.
OU342997.1:5998974-5998993
GCCTTGGTGGCCAATTGTTTCCTCGGGGCT5998974TTTCCTCCGGTTGACTTACGAGCGGTCTGCTTGGTTCTTGCCATCTTTGC
Lineus longissimus genome assembly, chromosome: 6.
OU342997.1:6013797-6013816
GCCTTGGTGGCCAATTGTTTCCTCGGGGCT6013797TTTCCTCCGGTTGACTTACGAGCGGTCTGCTTGGTTCTTGCCATCTTTGC
Lineus longissimus genome assembly, chromosome: 6.
OU342997.1:6020564-6020583
GCCTTGGTGGCCAATTGTTTCCTCGGGGCT6020564TTTCCTCCGGTTGACTTACGAGCGGTCTGCTTGGTTCTTGCCATCTTTAC
Lineus longissimus genome assembly, chromosome: 6.
OU342997.1:6027378-6027397
CCTTTGGTGGCCAATTGTTTCCTCGGGGCT6027378TTTCCTCCGGTTGACTTACGAGCGGTCTGCTTGGTTCTTGCCATCTTTAC
Lineus longissimus genome assembly, chromosome: 6.
OU342997.1:6034184-6034203
GCCTTGGTGGCCAATTGTTTCCTCGGGGCT6034184TTTCCTCCGGTTGACTTACGAGCGGTCTGCTTGGTTCTTGCCATCTTTAC
Lineus longissimus genome assembly, chromosome: 6.
OU342997.1:6040244-6040263
GCCTTGGTGGCCAATTGTTTCCTCGGGGCT6040244TTTCCTCCGGTTGACTTACGAGCGGTCTGCTTGGTTCTTGCCATCTTTAC
Ancistrocerus nigricornis genome assembly, chromosome: 4.
OU696667.1:33760207-33760226
GCTTTTGTAGCAAGCTGTTTGCGGGGAGCT33760207TTTCCTCCGGTTGACTTACGAGCTGTTTGCTTTGTACGTGCCATGGTTTA
Anopheles cruzii genome assembly, chromosome: 3.
OX030880.1:13097927-13097946
GCCTTGGTGGCCAGCTGCTTACGGGGAGCC13097927TTTCCTCCGGTTGACTTACGTGCTGTCTGCTTAGTACGCGCCATGTCTTC
Lagria hirta genome assembly, chromosome: 10.
OX375804.1:8452117-8452136
GCTTTGGTGGCGAGCTGTTTACGAGGAGCT8452117TTTCCTCCGGTTGACTTACGGGCTGTCTGTTTTGTACGAGCCATATTTAC
Ricordea florida genome assembly, chromosome: 2.
OX453273.1:26679475-26679494
GCTTTAGTGGCGAGCTGCTTTCTTGGGGCT26679475TTTCCTCCGGTTGACTTACGTGCCGTTTGTTTCGTACGGGCCATATTTTA
Anthopleura xanthogrammica genome assembly, chromosome: 12.
OZ025217.1:3933684-3933703
GCTTTGGTGGCCAACTGTTTTCGTGGAGCC3933684TTTCCTCCGGTTGACTTACGTGCTGTCTGCTTCGTACGAGCCATTCTTCT
Madracis auretenra genome assembly, chromosome: 8.
OZ060706.1:12960461-12960480
GCTTTGGTTGCGAGTTGTTTTCGTGGAGCT12960461TTTCCTCCGGTTGACTTACGGGCGGTCTGTTTCGTGCGGGCCATTTCAAG
Cyphastrea salae genome assembly, chromosome: 8.
OZ077370.1:2292829-2292848
GCTTTGGTCGCTAGCTGTTTACGAGGAGCT2292829TTTCCTCCGGTTGACTTACGAGCGGTTTGCTTGGTACGAGCCATTTTCTT
Condylactis gigantea genome assembly, chromosome: 15.
OZ177733.1:6767849-6767868
GCTTTGGTAGCCAACTGTTTTCGTGGAGCC6767849TTTCCTCCGGTTGACTTACGAGCGGTCTGCTTTGTACGAGCCATTCTTTT
Anthopleura artemisia genome assembly, chromosome: 12.
OZ200492.1:10919408-10919427
GCCTTGGTGGCCAACTGTTTTCGTGGAGCC10919408TTTCCTCCGGTTGACTTACGTGCTGTTTGCTTTGTACGAGCCATTTTTCT
Culex theileri genome assembly, chromosome: 1.
OZ203899.1:117607977-117607996
TCGTTGGTTGCTAACCGCTTTCGTGGGGCC117607977TTTCCTCCGGTTGACTTACGCTTCATAGCGTGCAGTCAAGCTGACCACAT
Anopheles cruzii genome assembly, chromosome: 3RL.
OZ207241.1:13441581-13441600
GCCTTGGTGGCCAGCTGCTTACGGGGAGCC13441581TTTCCTCCGGTTGACTTACGTGCTGTCTGCTTAGTACGCGCCATGTCTTC
Anopheles cruzii genome assembly, chromosome: 3RL.
OZ207245.1:13621692-13621711
GCCTTGGTGGCCAGCTGCTTACGGGGAGCC13621692TTTCCTCCGGTTGACTTACGTGCTGTCTGCTTAGTACGCGCCATGTCTTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTTCCTCCGGTTGACTTACG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTCCTCCGGTTGACTTACG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.346 | 1.337 | search_plus_done; http://172.18.8.135:50800/match?q=TTTCCTCCGGTTGACTTACG&k=0&no_gap=0&offset=0&limit=50
2.050 | 0.704 | search_minus_done; http://172.18.8.135:50800/match?q=CGTAAGTCAACCGGAGGAAA&k=0&no_gap=0&offset=0&limit=0
2.050 | 0.000 | cgi_end;

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