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2025-04-15 14:21:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

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Sciurus vulgaris genome assembly, chromosome: 6.
LR738616.1:122183520-122183539

GAGCCTCCTCACTGGCATGTCTGTATAGCC122183520TTTCCTCCTCCAAATCCTCCTCCACCCAGCTGCTGTGCTTCCTAAAGTAC

Onychomys torridus genome assembly, chromosome: X.
LR877211.1:33064621-33064640

TGATGATATCTTATTGTTCAAGAGTCTTTA33064621TTTCCTCCTCCAAATCCTCCCACATACTCCTCTCCACTCTCCAAAATCAT

Acomys kempi genome assembly, chromosome: X.
OU015373.1:113963493-113963512

AATAATATAATTACATCATTCCTCCTTCCC113963493TTTCCTCCTCCAAATCCTCCCATATATCCTTCCTTGCTTTTTTTTCAAGT

Heterocephalus glaber genome assembly, chromosome: 16.
OX090924.1:34634141-34634160

GAGCCTCCTCACTGGTGTGATTGTATAGCC34634141TTTCCTCCTCCAAATCCTCCTCCACCCAGCTGCTGTGCTTCCTAAAGTAC

Apodemus sylvaticus genome assembly, chromosome: 2.
OX359298.1:31033784-31033803

TTTTTCCTACAATACATTCTTATTGCATCT31033784TTTCCTCCTCCAAATCCTCCCAGATCCTCCCCAACACCCTTCCCTTCTTT

Onychomys arenicola genome assembly, chromosome: X.
OX460370.1:142566602-142566621

TGATGATATCTTATTGTTCAAGAGTCTTTA142566602TTTCCTCCTCCAAATCCTCCCACATACTCCTCTCCACTCTCCAAAATCAT

Peromyscus eremicus genome assembly, chromosome: 6.
OX460399.1:47420586-47420605

GAAATTTTAATTGTAACATTTGTCCCTTTC47420586TTTCCTCCTCCAAATCCTCCAATACATCTCTCCCTGTTCTCGGTAAAACT

Onychomys arenicola genome assembly, chromosome: X.
OX460465.1:134040840-134040859

TGATGATATCTTATTGTTCAAGAGTCTTTA134040840TTTCCTCCTCCAAATCCTCCCACATACTCCTCTCCACTCTCCAAAATCAT

Peromyscus eremicus genome assembly, chromosome: 6.
OX460471.1:50417414-50417433

GAAATTTTAATTGTAACATTTGTCCCTTTC50417414TTTCCTCCTCCAAATCCTCCAATACATCTCTCCCTGTTCTCGGTAAAACT

Onychomys torridus genome assembly, chromosome: X.
OX460905.1:112046309-112046328

TGATGATATCTTATTGTTCAAGAGTCTTTA112046309TTTCCTCCTCCAAATCCTCCCACATACTCCTCTCCACTCTCCAAAATCAT

Chionomys nivalis genome assembly, chromosome: 2.
OX465450.1:102662653-102662672

TTATTATATATATATATATATATCCTTCCC102662653TTTCCTCCTCCAAATCCTCCCATTTACTCCTCTTACGGCCTTCTTGAGAG

Muscardinus avellanarius genome assembly, chromosome: 11.
OY726568.1:76975918-76975937

AAATGGGATACTCAACAAATATTCTCTGGG76975918TTTCCTCCTCCAAATCCTCCATTCCCTGACCACAAAGAGAAGATCCCAGA

Felis catus Senzu DNA, chromosome: B2, American Shorthair breed.
AP023156.1:79157394-79157413

TTTCTTGTTCTTCCTTTTTTCTCTCTTCTT79157394TTTCCTCCTCCAAATCCTCCTATTTGTCCTCCTTTTGATTCATCTAGTTT

Acipenser ruthenus genome assembly, chromosome: 7.
OV737688.1:10278711-10278730

GCGCTCTTACATTTTTCTGCTTTTCCTCTT10278711TTTCCTCCTCCAAATCCTCCCACTCATCACTGCTGATGGGTGGCTGTTCC

Acipenser ruthenus genome assembly, chromosome: 7.
OV754676.1:10296159-10296178

GCGCTCTTACATTTTTCTGCTTTTCCTCTT10296159TTTCCTCCTCCAAATCCTCCCACTCATCACTGCTGATGGGTGGCTGTTCC

Lipophrys pholis genome assembly, chromosome: 8.
OY726540.1:17811965-17811984

CCTGCTCCTCCTCATCATCCCCCTTTTCCT17811965TTTCCTCCTCCAAATCCTCCTCCCCCTCCTCCTCCCCCACATCTTCGTCC

Limanda limanda genome assembly, chromosome: 4.
OY754995.1:10138934-10138953

ATAAATTTGTATATGAAAAAATAATAAACT10138934TTTCCTCCTCCAAATCCTCCCCATTAAATATTAGATATTTTTATCTGTGT

GA__Ea0011B11f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ea0011B11f, mRNA sequence.
BG440949.1:427-446

CCGCCGCCTCCACCGCGGCTGTAACCACCG427TTTCCTCCTCCAAATCCTCCGCCACCGCCTCCACTTCTGCGCGATTGGGC

GR__Ea33B07.f GR__Ea Gossypium raimondii cDNA clone GR__Ea33B07 5', mRNA sequence.
CO073440.1:385-404

CCGCCGCCTCCACCGGGGGTGTAACCACCG385TTTCCTCCTCCAAATCCTCCGCCACCGCCCCCACTTCTGCGCGATTGGGC

GR__Ea34J08.f GR__Ea Gossypium raimondii cDNA clone GR__Ea34J08 5', mRNA sequence.
CO074461.1:360-379

CCGCCGCCTCCACCGGGGATGTAACCACCG360TTTCCTCCTCCAAATCCTCCGCCACCGCCCCCACTTCTGCGCGATTGGGC

GR__Ea14G13.f GR__Ea Gossypium raimondii cDNA clone GR__Ea14G13 5', mRNA sequence.
CO093043.1:395-414

CCGGGGCCTCCACGGGGGGGGGAACCACCG395TTTCCTCCTCCAAATCCTCCGCCACCGCCCCCATTTTTGGGGGATGGGGG

GR__Ea18H01.f GR__Ea Gossypium raimondii cDNA clone GR__Ea18H01 5', mRNA sequence.
CO095685.1:389-408

CCGCCGCCTCCACCGCGGCTGTAACCACCG389TTTCCTCCTCCAAATCCTCCGCCACCGCCCCCACTTCTGCGCGATTGGGC

GR__Ea18H02.f GR__Ea Gossypium raimondii cDNA clone GR__Ea18H02 5', mRNA sequence.
CO095687.1:385-404

CCGCCGCCTCCACCGCGGGTGTAACCACCG385TTTCCTCCTCCAAATCCTCCGCCACCGCCCCCACTTCTGCGCGATTGGGC

COT_FV_D01 Fiber and Ovule of Xu-142 Lambda Zap Express Library Gossypium hirsutum cDNA 3' similar to (AB007819) glycine-rich RNA-binding protein [Citrus unshiu], mRNA sequence.
DT053826.1:381-400

CCGCCGCCTCCACCGCGGCTGTAACCACCG381TTTCCTCCTCCAAATCCTCCGCCACCGCCTCCACTTCTGCGCGATTGGGC

COT_FV_F08 Fiber and Ovule of Xu-142 Lambda Zap Express Library Gossypium hirsutum cDNA 3' similar to (AB007819) glycine-rich RNA-binding protein [Citrus unshiu], mRNA sequence.
DT053853.1:381-400

CCGCCGCCTCCACCGCGGCTGTAACCACCG381TTTCCTCCTCCAAATCCTCCGCCACCGCCTCCACTTCTGCGCGATTGGGC

COT_FY_D05 Fiber and Ovule of Xu-142 Lambda Zap Express Library Gossypium hirsutum cDNA 3' similar to (AB007819) glycine-rich RNA-binding protein [Citrus unshiu], mRNA sequence.
DT054070.1:384-403

CCGCCGCCTCCACCGCGGCTGTAACCACCG384TTTCCTCCTCCAAATCCTCCGCCACCGCCTCCACTTCTGCGCGATTGGGC

COT_FZ_G04 Fiber and Ovule of Xu-142 Lambda Zap Express Library Gossypium hirsutum cDNA 3' similar to (X58146) glycine-rich protein [Daucus carota], mRNA sequence.
DT054175.1:381-400

GCCGCGCCTCCACCGCGGCTGTAACCACCG381TTTCCTCCTCCAAATCCTCCGGCCACCGGCTCCACTTCTGCGCGATTGGG

GH_HYPT_01-01-22R_G05_InvR_29Apr04_035_R Stem - 3 weeks after planting Gossypium hirsutum cDNA, mRNA sequence.
DW226534.1:390-409

CCGCCGCCTCCACCGCGGCTGTAACCACCG390TTTCCTCCTCCAAATCCTCCGCCACCGCCTCCACTTCTGCGCGATTGGGC

GH_RMIRS_027_F02_R Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA sequence.
DW480837.1:239-258

CCGCCGCCTCCACCGCGGCTGTAACCACCG239TTTCCTCCTCCAAATCCTCCGCCACCGCCTCCACTTCTGCGCGATTGGGC

GH_TMIRS_119_E03_R Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequence.
DW507965.1:349-368

CCGCCGCCTCCACCGCGGCTGTAACCACCG349TTTCCTCCTCCAAATCCTCCGCCACCGCCTCCACTTCTGCGCGATTGGGC

GH_TMIRS_119_E03_R Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequence.
DW507965.1:764-783

CCGCCGCCTCCACCGCGGCTGTAACCACCG764TTTCCTCCTCCAAATCCTCCGCCCACGCCTCCACTTCTGCGCGATAGGGC

UFL_527_54 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES790560.1:423-442

CCGCCGCCTCCACCGCGGCTGTAACCACCG423TTTCCTCCTCCAAATCCTCCGCCACCGCCTCCACTTCTGCGCGATTGGGC

UFL_538_69 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES803213.1:413-432

CCGCCGCCTCCACCGCGGCTGTAACCACCG413TTTCCTCCTCCAAATCCTCCGCCACCGCCTCCACTTCTGCGCGATTGGGC

UFL_640_67 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES805698.1:412-431

CCGCCGCCTCCACCGCGGCTGGAACCACCG412TTTCCTCCTCCAAATCCTCCGCCACCGCCTCCACTTCTGCGCGATTGGGC

UFL_062_49 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES840199.1:382-401

CCGCCGCCTCCACCGCGGCTGTAACCACCG382TTTCCTCCTCCAAATCCTCCGCCACCGCCTCCACTTCTGCGCGATTGGGC

UFL_104_13 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES843821.1:414-433

CCGCCGCCTCCACCGCGGCTGTAACCACCG414TTTCCTCCTCCAAATCCTCCGCCACCGCCTCCACTTCTGCGCGATTGGGC

sg145E09 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence.
EV498592.1:418-437

ATTTCCCATAGGAGGCGGCTGTAACCACCG418TTTCCTCCTCCAAATCCTCCGCCACCGCCTCCACTTCTGCGCGATTGGGC

rmhcyd0_000343.y1.scf cotton shoot apical meristems, buds and flowers Gossypium hirsutum cDNA 3', mRNA sequence.
HO104647.1:407-426

CCGCCGCCTCCACCGCGGCTGTAACCACCG407TTTCCTCCTCCAAATCCTCCGCCACCGCCTCCACTTCTGCGCGATTGGGC

A02_51547.2.S1108222193.LDYN1-4610.M13-R.ab1 Gossypium hirsutum L. cotton leaves cDNA library Gossypium hirsutum cDNA 3', mRNA sequence.
JZ110220.1:382-401

CCGCCGCCTCCACCGCGGCTGTAACCACCG382TTTCCTCCTCCAAATCCTCCGCCACCGCCTCCACTTCTGCGCGATTGGGC

A10_51707.10.S1108263232.LDYN1-10282.M13-R.ab1 Gossypium hirsutum L. cotton leaves cDNA library Gossypium hirsutum cDNA 3', mRNA sequence.
JZ111102.1:459-478

CCGCCGCCTCCACCGCGGCTGTAACCACCG459TTTCCTCCTCCAAATCCTCCGCCACCGCCTCCACTTCTGCGCGATTGGGC

B01_51431.13.S1108183488.LDYN1-1357.M13-R.ab1 Gossypium hirsutum L. cotton leaves cDNA library Gossypium hirsutum cDNA 3', mRNA sequence.
JZ111323.1:380-399

CCGCCGCCTCCACCGCGGCTGTAACCACCG380TTTCCTCCTCCAAATCCTCCGCCACCGCCTCCACTTCTGCGCGATTGGGC

C02_51605.26.S1108242333.LDYN1-7706.M13-R.ab1 Gossypium hirsutum L. cotton leaves cDNA library Gossypium hirsutum cDNA 3', mRNA sequence.
JZ112665.1:382-401

CCGCCGCCTCCACCGCGGCTGTAACCACCG382TTTCCTCCTCCAAATCCTCCGCCACCGCCTCCACTTCTGCGCGATTGGGC

C07_51488.31.S1108193402.LDYN1-1855.M13-R.ab1 Gossypium hirsutum L. cotton leaves cDNA library Gossypium hirsutum cDNA 3', mRNA sequence.
JZ113138.1:382-401

CCGCCGCCTCCACCGCGGCTGTAACCACCG382TTTCCTCCTCCAAATCCTCCGCCACCGCCTCCACTTCTGCGCGATTGGGC

D07_51668.43.S1108252954.LDYN1-8491.M13-R.ab1 Gossypium hirsutum L. cotton leaves cDNA library Gossypium hirsutum cDNA 3', mRNA sequence.
JZ114412.1:382-401

CCGCCGCCTCCACCGCGGCTGTAACCACCG382TTTCCTCCTCCAAATCCTCCGCCACCGCCTCCACTTCTGCGCGATTGGGC

D08_51582.44.S1108232427.LDYN1-7244.M13-R.ab1 Gossypium hirsutum L. cotton leaves cDNA library Gossypium hirsutum cDNA 3', mRNA sequence.
JZ114511.1:384-403

CCGCCGCCTCCACCGCGGCTGTAACCACCG384TTTCCTCCTCCAAATCCTCCGCCACCGCCTCCACTTCTGCGCGATTGGGC

G04_51512.76.S1108202459.LDYN1-3436.M13-R.ab1 Gossypium hirsutum L. cotton leaves cDNA library Gossypium hirsutum cDNA 3', mRNA sequence.
JZ117680.1:382-401

CCGCCGCCTCCACCGCGGCTGTAACCACCG382TTTCCTCCTCCAAATCCTCCGCCACCGCCTCCACTTCTGCGCGATTGGGC

H08_51539.92.S1108223915.LDYN1-6332.M13-R.ab1 Gossypium hirsutum L. cotton leaves cDNA library Gossypium hirsutum cDNA 3', mRNA sequence.
JZ119316.1:380-399

CCGCCGCCTCCACCGCGGCTGTAACCACCG380TTTCCTCCTCCAAATCCTCCGCCACCGCCTCCACTTCTGCGCGATTGGGC

TSA: Junco hyemalis isotig26904.JH, mRNA sequence.
JV184022.1:967-986

TCCATGCAGTGTTCTCACACTTTTATCACT967TTTCCTCCTCCAAATCCTCCAGAGAGACTCTCTCTCCTCAAGCATTACCT

Gossypium raimondii isolate D5-4 chromosome D5_13.
CP032565.1:2945496-2945515

CCGCCGCCTCCACCGCGGCTGTAACCACCG2945496TTTCCTCCTCCAAATCCTCCGCCACCGCCCCCACTTCTGCGCGATTGGGC

Gossypium turneri isolate D10-2 chromosome D10_13.
CP032583.1:3058580-3058599

CCGCCGCCTCCACCGCGGCTGTAACCGCCG3058580TTTCCTCCTCCAAATCCTCCACCTCCGCCTCCACTTCTGCGCGATTGGGC

Gossypium herbaceum isolate Zhongcao1 chromosome 12.
CP106691.1:49883201-49883220

CAACAACCCCTCTCTTCCCAAATTTCCTAT49883201TTTCCTCCTCCAAATCCTCCTCATATCTCTCAATCGATAACTCCTCAATC

Gossypium herbaceum isolate GPA1alz chromosome 13.
CP106700.1:3816116-3816135

CCGCCGCCTCCACCGCGGCTGTAACCACCG3816116TTTCCTCCTCCAAATCCTCCGCCACCGCCTCCACTTCTGCGCGATTGGGC

Hordeum bulbosum genome assembly, chromosome: 3H_1.
OY737411.1:514417419-514417438

CCTCTTCCTCCCCCTTCTCCAACTCCTCCT514417419TTTCCTCCTCCAAATCCTCCTCCGGATCCAGTGGATTTAGAGGTAGCCTC

Hordeum bulbosum genome assembly, chromosome: 3H_2.
OY737418.1:524793886-524793905

CCTCTTCCTCCCCCTTCTCCAGCTCCTCCT524793886TTTCCTCCTCCAAATCCTCCTCCGGATCAAGTGGATCTAGAGGTAGCCTC

Hordeum bulbosum genome assembly, chromosome: 3H_4.
OY737483.1:475330634-475330653

CCTCTTCCTCCCCCTTCTCCAACTCCTCCT475330634TTTCCTCCTCCAAATCCTCCTCCGGATCCAGTGGATCTAGAGGTAGCCTC

Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737869.1:251867227-251867246

CCCAGCCGGCTCGCTCGGCAGCGAAGGAGG251867227TTTCCTCCTCCAAATCCTCCGTGTCCCCACCAAGCACCGCGCTGAGGAAC

Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737876.1:228954727-228954746

CCCAGCCGGCTCGCTCGGCAGCGAAGGAGG228954727TTTCCTCCTCCAAATCCTCCGTGTCCCCACCAAGCACCGCGCTGAGGAAC

Cyprideis torosa.
OB667723.1:5166-5185

AATCCTCCTTTGCCACCCCCGAATCCACCC5166TTTCCTCCTCCAAATCCTCCACCTCCGAAGCCACCTCCACCGAAACCACC

Ocypus olens genome assembly, chromosome: 3.
OU343049.1:56363245-56363264

ATTCCGCGATTTGCACGGATCTAAGCTCGA56363245TTTCCTCCTCCAAATCCTCCGTTCCTTCCTGACCACACTCCTTAAGTTTA

Allacma fusca genome assembly, chromosome: 4.
OX359248.1:43073708-43073727

CTGTTCGGATTGTCACTACCAAAGCCACCA43073708TTTCCTCCTCCAAATCCTCCGCCATTGTTTCCATTTCCCCCGCCAAAGCC

Lochmaea crataegi genome assembly, chromosome: 5.
OX387427.1:12848602-12848621

CCTCCTCCAAATCCTCCACCACCGCCTCCT12848602TTTCCTCCTCCAAATCCTCCGGCACTGCTGCCACCATATCCACTTCCTCC

Lochmaea capreae genome assembly, chromosome: 6.
OX421400.1:9448686-9448705

CCTCCAAATCCTGCGCCACCTCCGCCTCCC9448686TTTCCTCCTCCAAATCCTCCGCCACTGCTGCCACCATATCCACTTCCTCC

Lumbricus terrestris genome assembly, chromosome: 16.
OX457051.1:40622115-40622134

CCTTCTCCTCCTCCTTTTCCTTCTCCTCCT40622115TTTCCTCCTCCAAATCCTCCCCCTCCTTCTCACTCTCCTCCCCCTCCTCA

Hemicrepidius niger genome assembly, chromosome: 2.
OY720160.1:4994841-4994860

TTGATGTATGTTTAACGGCCATAACCACCT4994841TTTCCTCCTCCAAATCCTCCACCACCTCCTCCACCGCCATTTCCCTTGCC

Rhodophaea formosa genome assembly, chromosome: 5.
OY720208.1:18596225-18596244

TTAAAACAAAACGCAAATTCAAAATACCAT18596225TTTCCTCCTCCAAATCCTCCAAAGCGAGTAGAGAGTACATGAGATGATGA

Ceriagrion tenellum genome assembly, chromosome: X.
OY720638.1:52092963-52092982

TGATAGCGTATTCGGGAATGTTGAGGGCAG52092963TTTCCTCCTCCAAATCCTCCTGGCTCCCTAGCTCTCCTCCCCTTTTCGAA

Symsagittifera roscoffensis genome assembly, chromosome: 8.
OY783241.1:3453827-3453846

CATTAACAATTCATCACTTATCACAATCCG3453827TTTCCTCCTCCAAATCCTCCAACCCAGCCTCCACAGTAGAAGAAACCAGA

Symsagittifera roscoffensis genome assembly, chromosome: 8.
OY783241.1:3464536-3464555

CATTAACAATTCATCACTTATCACAATCCG3464536TTTCCTCCTCCAAATCCTCCAACCCAGCCTCCACAGTAGAAGAAACCAGA

Galeruca laticollis genome assembly, chromosome: 4.
OY998178.1:113230442-113230461

ATATTAGAATTTCTGATTTTATCACCTCCT113230442TTTCCTCCTCCAAATCCTCCGTCGCCTGCGCCACCGATTCCGCCTCCGAT

Caenorhabditis macrosperma genome assembly, chromosome: I.
OZ010622.1:12508496-12508515

TCAACTGTATTATCATCGCTTTCCGTTGCT12508496TTTCCTCCTCCAAATCCTCCATTTTCACCCGCGGAGCCATAAAATCCGCA

Pediacus dermestoides genome assembly, chromosome: 3.
OZ012627.1:2435723-2435742

TCCGATGAGCACAACGAACAAGTTCCAAAT2435723TTTCCTCCTCCAAATCCTCCATTGATGCTTCGAATTAACGCACAAACTGT

Data Export:

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Debug Info:

0.009 | 0.009 | search_start;
1.686 | 1.677 | search_plus_done; http://172.18.8.135:50400/match?q=TTTCCTCCTCCAAATCCTCC&k=0&no_gap=0&offset=0&limit=50
1.770 | 0.083 | search_minus_done; http://172.18.8.135:50400/match?q=GGAGGATTTGGAGGAGGAAA&k=0&no_gap=0&offset=0&limit=0
1.770 | 0.000 | cgi_end;

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