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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-20 12:01:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Homo sapiens heparan sulfate 6-O-sulfotransferase 3 (HS6ST3) mRNA, complete cds.
AF539426.1:719-736
TCATGGAGAAGAAGGACTGTCCCCGCAACC719ACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAG
Homo sapiens cDNA FLJ45000 fis, clone BRAWH3011331, highly similar to Heparan-sulfate 6-O-sulfotransferase 3 (EC 2.8.2.-).
AK126947.1:221-238
TCATGGAGAAGAAGGACTGTCCCCGCAACC221ACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAG
Mus musculus mRNA for heparan sulfate 6-sulfotransferase 3, complete cds.
AB024567.1:805-822
TCATGGAGAAGAAGGATTGTCCCCGCAACC805ACAGCCACACCAGGAATTTCTACTACATCACGATGTTGCGGGACCCAG
Mus musculus heparan sulfate 6-O-sulfotransferase 3, mRNA (cDNA clone MGC:144860 IMAGE:40106840), complete cds.
BC117529.1:660-677
TCATGGAGAAGAAGGATTGTCCCCGCAACC660ACAGCCACACCAGGAATTTCTACTACATCACGATGTTGCGGGACCCAG
Mus musculus heparan sulfate 6-O-sulfotransferase 3, mRNA (cDNA clone MGC:144859 IMAGE:40106835), complete cds.
BC118035.1:766-783
TCATGGAGAAGAAGGATTGTCCCCGCAACC766ACAGCCACACCAGGAATTTCTACTACATCACGATGTTGCGGGACCCAG
Onychomys arenicola genome assembly, chromosome: 2.
OX460348.1:125574527-125574544
ATTCTTCTGTTGGCTGCACTGTTTGCAGGG125574527ACAGCCACACCAGGAATTAAAAGCAATTAGAGAAAATATCCTTAAACT
Onychomys arenicola genome assembly, chromosome: 2.
OX460443.1:127476777-127476794
ATTCTTCTGTTGGCTGCACTGTTTGCAGGG127476777ACAGCCACACCAGGAATTAAAAGCAATTAGAGAAAATATCCTTAAACT
Capricornis sumatraensis isolate serow.1 chromosome 4.
CP135629.1:17419807-17419824
TCACTTTCTGATGTAATCCTGGTCTTACTA17419807ACAGCCACACCAGGAATTCAGCCAAACAAATTTGGCAGCAGTCAGCTC
Meles meles genome assembly, chromosome: 7.
OV277447.1:132535836-132535853
TGATAGGACATCGCAGGCAGAGTTTGGTCC132535836ACAGCCACACCAGGAATTTGGAAAGATCCATTCTAAGATATAACACAC
Streptopelia turtur genome assembly, chromosome: 6.
LR594558.1:37609111-37609128
ACGCATTAAAGGCAAACCCAGATTCCAGTA37609111ACAGCCACACCAGGAATTAGCTGGGATGCAGCATGTCCTCAGAAATTC
Thalassophryne amazonica genome assembly, chromosome: 11.
LR722976.1:3107345-3107362
AACCAAACAAATTCAATTTACTGGCAGAGG3107345ACAGCCACACCAGGAATTTGTTTTAAGTCTTTCATGCTTCACGCTCTT
Erithacus rubecula genome assembly, chromosome: 1.
LR812103.1:93138794-93138811
AGTATTCAGTGAGCAGCTGAATCACACCAC93138794ACAGCCACACCAGGAATTGTCTCCAGCTTTTCTGCAGTTGCATAAAGT
Erithacus rubecula genome assembly, chromosome: 24.
LR812127.1:7242058-7242075
CAAAGAATCAGTATGCAGAATTTATGACTG7242058ACAGCCACACCAGGAATTGGCACAAGGGGATGATCCAGTAATGGGGTA
Bufo bufo genome assembly, chromosome: 1.
LR991667.1:746840920-746840937
TACGGCCCACTGGGTGAATGCGGTTCCTGC746840920ACAGCCACACCAGGAATTTGGCCAGGTGACACTGCTTCCGCCTCCACG
Bufo bufo genome assembly, chromosome: 8.
LR991674.1:213668434-213668451
TACGGACCACTGGGTAAATGTGGTTTCTGC213668434ACAGCCACACCAGGAATTTGGCCAGGTGATGCCGCTTCTGCCTCCACA
Solea solea genome assembly, chromosome: 7.
OY282540.1:25174367-25174384
CTCAACCAAGGGTAAGTCAAGTGGAAGAAA25174367ACAGCCACACCAGGAATTTGCTATAATTAACACAAATTCAACCAGTTA
Fringilla coelebs genome assembly, chromosome: Z.
OY740727.1:49320652-49320669
TGTATATGCATGGAGGAGTGTCACCTCTGT49320652ACAGCCACACCAGGAATTTGTTCTAATTTTCCCTTAAAACACATTTTT
Fringilla coelebs genome assembly, chromosome: 18.
OY740742.1:715763-715780
CTCCCAGCAGGCAGGGTGCATCCCAGGGGA715763ACAGCCACACCAGGAATTGGTAACATCTGCCCCCCCATTGCCAGCACC
Cinclus cinclus genome assembly, chromosome: 23.
OY759700.1:8651445-8651462
AAACAGTCAGTACGCAGAATTTATTGACTG8651445ACAGCCACACCAGGAATTGGCACAGGGGGATGATCCAGTAATGGGGTA
Sequence 201 from Patent WO02068649.
AX921861.1:771-788
TCATGGAGAAGAAGGACTGTCCCCGCAACC771ACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAG
Sequence 350 from Patent EP1447413.
CQ849881.1:221-238
TCATGGAGAAGAAGGACTGTCCCCGCAACC221ACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAG
JP 2005058162-A/3: Knockout animal.
DD136196.1:805-822
TCATGGAGAAGAAGGATTGTCCCCGCAACC805ACAGCCACACCAGGAATTTCTACTACATCACGATGTTGCGGGACCCAG
JP 2005006658-A/350: Full length cDNA.
DL210504.1:221-238
TCATGGAGAAGAAGGACTGTCCCCGCAACC221ACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAG
JP 2000060566-A/3: Sulfotransferase and DNA encoding the same.
E32351.1:805-822
TCATGGAGAAGAAGGATTGTCCCCGCAACC805ACAGCCACACCAGGAATTTCTACTACATCACGATGTTGCGGGACCCAG
JP 2010011854-A/3: Knockout animal.
HV306494.1:805-822
TCATGGAGAAGAAGGATTGTCCCCGCAACC805ACAGCCACACCAGGAATTTCTACTACATCACGATGTTGCGGGACCCAG
JP 2015516143-A/13411: MODIFIED POLYNUCLEOTIDES FOR THE PRODUCTION OF PROTEINS ASSOCIATED WITH HUMAN DISEASE.
LF419040.1:719-736
TCATGGAGAAGAAGGACTGTCCCCGCAACC719ACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAG
JP 2017121241-A/13411: MODIFIED POLYNUCLEOTIDES FOR THE PRODUCTION OF PROTEINS ASSOCIATED WITH HUMAN DISEASE.
LX359370.1:719-736
TCATGGAGAAGAAGGACTGTCCCCGCAACC719ACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAG
JP 2019054813-A/13411: MODIFIED POLYNUCLEOTIDES FOR THE PRODUCTION OF PROTEINS ASSOCIATED WITH HUMAN DISEASE.
MD453184.1:719-736
TCATGGAGAAGAAGGACTGTCCCCGCAACC719ACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAG
Sequence 9288 from patent US 11111535.
MY486780.1:695-712
TCATGGAGAAGAAGGACTGTCCCCGCAACC695ACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAG
Sequence 140217 from patent US 11446398.
OS634975.1:719-736
TCATGGAGAAGAAGGACTGTCCCCGCAACC719ACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAG
Synthetic construct Homo sapiens clone IMAGE:100061837, MGC:190112 heparan sulfate 6-O-sulfotransferase 3 (HS6ST3) mRNA, encodes complete protein.
BC156337.1:729-746
TCATGGAGAAGAAGGACTGTCCCCGCAACC729ACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAG
Synthetic construct Homo sapiens clone IMAGE:100063469, MGC:190785 heparan sulfate 6-O-sulfotransferase 3 (HS6ST3) mRNA, encodes complete protein.
BC157125.1:729-746
TCATGGAGAAGAAGGACTGTCCCCGCAACC729ACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAG
Homo sapiens cDNA clone BRAWH3011331, 5' end, mRNA sequence.
DA219762.1:221-238
TCATGGAGAAGAAGGACTGTCCCCGCAACC221ACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAG
Brassica oleracea var. viridis mRNA, clone: KALE-152B16, 5' end sequence.
DK513706.1:502-519
GATGCTCCCTTGGATGGACCGATGGGCCCC502ACAGCCACACCAGGAATTCGACCGGTGGTTCAGCCCTTGCAACCCACT
Brassica oleracea var. viridis mRNA, clone: KALE-152B16, 3' end sequence.
DK573279.1:502-519
GATGCTCCCTTGGATGGACCGATGGGCCCC502ACAGCCACACCAGGAATTCGACCGGTGGTTCAGCCCTTGCAACCCACT
000210BCXB008127HT BCXB Bos taurus cDNA 5', mRNA sequence.
DY069532.1:137-154
TCATGGAGAAGAAAGACTGTCCCCGCAACC137ACAGCCACACCAGGAATTTCTATTACATCACCATGTTGCGGGATCCAG
000206BCXB004129HT BCXB Bos taurus cDNA 5', mRNA sequence.
DY076397.1:134-151
TCATGGAGAAGAAAGACTGTCCCCGCAACC134ACAGCCACACCAGGAATTTCTATTACATCACCATGTTGCGGGATCCAG
15ACDHYS_UP_022_E07_21OCT2004_055 Brassica napus 15ACDHYS Brassica napus cDNA 5', mRNA sequence.
EE401778.1:121-138
GGTGCTCCCTTGGATGGACCGATGGGCCCC121ACAGCCACACCAGGAATTCGACCGGTGGTTCAGCCCTTGCAACCCACT
4ETGS72H_UP_015_F06_14FEB2005_038 Brassica napus 4ETGS72h Brassica napus cDNA 5', mRNA sequence.
EE434135.1:489-506
GATGCTCCCTTGGATGGACCGATGGGCCCC489ACAGCCACACCAGGAATTCGACCGGTGGTTCAGCCCTTGCAACCCACT
0150680 Brassica napus Etiolated seedlings (pSPORT1) Brassica napus cDNA, mRNA sequence.
EV179769.1:527-544
GATGCTCCCTTGGATGGACCGATGGGCCCC527ACAGCCACACCAGGAATTCGACCGGTGGTTCAGCCCTTGCAACCCACT
TSA: Capra hircus Seqhy16887.Cahihypoth mRNA sequence.
JO628433.2:81-98
TCATGGAGAAGAAAGACTGTCCCCGCAACC81ACAGCCACACCAGGAATTTCTATTACATCACCATGTTGCGGGATCCAG
TSA: Macaca mulatta Mamu_534003 mRNA sequence.
JU327948.1:83-100
TCATGGAGAAGAAGGACTGTCCCCGCAACC83ACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAG
TSA: Macaca mulatta Mamu_69308 mRNA sequence.
JV464605.1:380-397
TCATGGAGAAGAAGGACTGTCCCCGCAACC380ACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAG
TSA: Macaca mulatta Mamu_69309 mRNA sequence.
JV464606.1:342-359
TCATGGAGAAGAAGGACTGTCCCCGCAACC342ACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAG
TSA: Macaca mulatta Mamu_42204 mRNA sequence.
JV502635.1:364-381
TCATGGAGAAGAAGGACTGTCCCCGCAACC364ACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAG
TSA: Macaca mulatta Mamu_141618 mRNA sequence.
JV541017.1:531-548
TCATGGAGAAGAAGGACTGTCCCCGCAACC531ACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAG
TSA: Macaca mulatta Mamu_141619 mRNA sequence.
JV541018.1:399-416
TCATGGAGAAGAAGGACTGTCCCCGCAACC399ACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAG
TSA: Macaca mulatta Mamu_267339 mRNA sequence.
JV578300.1:496-513
TCATGGAGAAGAAGGACTGTCCCCGCAACC496ACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAG
TSA: Macaca mulatta Mamu_181913 mRNA sequence.
JV613068.1:497-514
TCATGGAGAAGAAGGACTGTCCCCGCAACC497ACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAG
TSA: Macaca mulatta Mamu_299495 mRNA sequence.
JV680316.1:475-492
TCATGGAGAAGAAGGACTGTCCCCGCAACC475ACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAG
TSA: Macaca mulatta Mamu_570193 mRNA sequence.
JV711947.1:373-390
TCATGGAGAAGAAGGACTGTCCCCGCAACC373ACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAG
TSA: Macaca mulatta Mamu_570194 mRNA sequence.
JV711948.1:373-390
TCATGGAGAAGAAGGACTGTCCCCGCAACC373ACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAG
oei87f04.g1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BZ002473.1:77-94
GATGCTCCCTTGGATGGACCGATGGGCCCC77ACAGCCACACCAGGAATTCGACCGGTGGTTCAGCCCTTGCAACCCACT
Homo sapiens mRNA; cDNA DKFZp761K2315 (from clone DKFZp761K2315).
CR749677.1:385-402
TCATGGAGAAGAAGGACTGTCCCCGCAACC385ACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAG
Brassica napus cultivar Xiang5A chromosome 6.
CP123881.1:71834934-71834951
GATGCTCCCTTGGATGGACCGATGGGCCCC71834934ACAGCCACACCAGGAATTCGACCGGTGGTTCAGCCCTTGCAACCCACT
Brassica napus cultivar Xiang5A chromosome 14.
CP123889.1:29479577-29479594
GATGCTCCCTTGGATGGACCGATGGGCCCC29479577ACAGCCACACCAGGAATTCGACCGGTGGTTCAGCCCTTGCAACCCACT
Brassica napus genome assembly, chromosome: A04.
HG994358.1:23094535-23094552
GATGCTCCCTTGGATGGACCGATGGGCCCC23094535ACAGCCACACCAGGAATTCGACCGGTGGTTCAGCCCTTGCAACCCACT
Brassica napus genome assembly, chromosome: A09.
HG994363.1:53509960-53509977
GATGCTCCCTTGGATGGACCGATGGGCCCC53509960ACAGCCACACCAGGAATTCGACCGGTGGTTCAGCCCTTGCAACCCACT
Brassica napus genome assembly, chromosome: C08.
HG994372.1:41676917-41676934
GGATGCTCCCTTGATGGACCGATGGGCCCC41676917ACAGCCACACCAGGAATTGACCGGTGGTTCAGCCTTGCAACCCACTAG
Brassica rapa genome, scaffold: A04.
LR031576.1:21685170-21685187
GATGCTCCCTTGGATGGACCGATGGGCCCC21685170ACAGCCACACCAGGAATTCGACCGGTGGTTCAGCCCTTGCAACCCACT
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:50914994-50915011
GATGCTCCCTTGGATGGACCGATGGGCCCC50914994ACAGCCACACCAGGAATTCGACCGGTGGTTCAGCCTTTGCAACCCACT
Brassica rapa genome assembly, chromosome: A04.
LS974620.2:22506734-22506751
GATGCTCCCTTGGATGGACCGATGGGCCCC22506734ACAGCCACACCAGGAATTCGACCGGTGGTTCAGCCCTTGCAACCCACT
Raphanus sativus genome assembly, chromosome: 4.
OY743210.1:46580644-46580661
GATGCTCCCTCGAATGGACCGATGGGCCCC46580644ACAGCCACACCAGGAATTCGGCCGGTGGTTCAGCCCTTGCAACCAACC
Flavobacterium magnum strain HYN0048 chromosome, complete genome.
CP028811.1:1872731-1872748
CAACGGCGAGCATCTTGATGACCATAGGCA1872731ACAGCCACACCAGGAATTTTCCCAATCGGCATAAAAAACCGGAATTGT
Parabacteroides chongii strain YMC B3181 chromosome.
CP120849.1:5548476-5548493
ATTGTACCGCGGGTCTGCCCTTTCACAAAA5548476ACAGCCACACCAGGAATTTCTTCACCTCCCGCAGTGACTTTACCTGTC
Nematostella vectensis genome assembly, chromosome: 4.
OW051988.1:17008908-17008925
GAATTTACCATTAGACTCTTGACAACTTTG17008908ACAGCCACACCAGGAATTGTGTTTGTTAACTTTGATGTACTGCATAAT
Nematostella vectensis genome assembly, chromosome: 11.
OW051995.1:14429936-14429953
GAATTTATCATTAGACTCTTGACAACTTTG14429936ACAGCCACACCAGGAATTGTGTTTGTTAACTTTGATGTACTGCATAAT
Nematostella vectensis genome assembly, chromosome: 14.
OW051998.1:6764623-6764640
GAATTTACCATTAGACTCTTGACAACTTTG6764623ACAGCCACACCAGGAATTGTGTTTGTTAACTTTGATGTACTGCATAAT
Charanyca ferruginea genome assembly, chromosome: 23.
OX376079.1:275164-275181
TTACTTCAAATTAAATACGTCCCACACATA275164ACAGCCACACCAGGAATTGTGAGGAGAATGTTATATTGTTAAACGTCG
Octopus vulgaris genome assembly, chromosome: 3.
OX597816.1:48085457-48085474
TACATGGTTGGGAAGCAAACTTCTTGCCAC48085457ACAGCCACACCAGGAATTTATATAGAAACGTAAAGAAAAAACAAAACT
Pedicia rivosa genome assembly, chromosome: 5.
OY720155.1:37232953-37232970
GGATAACGGTAATGGAATTATGGACAACGA37232953ACAGCCACACCAGGAATTGGTAAAATGTGTATTAGTCGGTAAATATAT
Sepioteuthis lessoniana genome assembly, chromosome: 1.
OY757904.1:80900165-80900182
AGCAATCTTTATGATTTCAGCTTCAAATGA80900165ACAGCCACACCAGGAATTGGAATACACCCTATAGTCTGGACGTGAGGA
Sepioteuthis lessoniana genome assembly, chromosome: 21.
OY757924.1:5750979-5750996
ACCAATTTTTATAATTTCAGGTTTAAATGA5750979ACAGCCACACCAGGAATTAGAAAGCCTAATTGTCACAGCTGGTGAATT
Sepioteuthis lessoniana genome assembly, chromosome: 37.
OY757940.1:21493997-21494014
ACCAATTTTTATGATTTCAGGTTCAAATCA21493997ACAGCCACACCAGGAATTAGAATACACCCTACTAAAGCCTGATTGCCA
Eudasyphora cyanicolor genome assembly, chromosome: 3.
OZ005736.1:207039847-207039864
AGTTACATAAACATTTTACGCAGCACAGCT207039847ACAGCCACACCAGGAATTTCCAAAACCCTCAGCATCTACAATACAATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/acagccacaccaggaatt
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : acagccacaccaggaatt | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.171 | 1.162 | search_plus_done; http://172.18.8.135:50400/match?q=ACAGCCACACCAGGAATT&k=0&no_gap=0&offset=0&limit=50
1.251 | 0.080 | search_minus_done; http://172.18.8.135:50400/match?q=AATTCCTGGTGTGGCTGT&k=0&no_gap=0&offset=0&limit=0
1.251 | 0.000 | cgi_end;

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