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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-10 10:19:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Citrus sinensis genome assembly, chromosome: 1.
OY754318.1:24128389-24128412
CTTGGACATCAGATCAGAAGAACCATTAGC24128389ATCAGGTTTGCCAGAATCAGTAGTGGAGCTTGAACCAACTTCTAAATGAAAACC
USDA-FP_4774 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE34F09 5', mRNA sequence.
CK701514.1:123-146
GGTTTTCATTTAGAAGTTGGTTCAAGCTCC123ACTACTGATTCTGGCAAACCTGATGCTAATGGTTCTTCTGATCTGATGTCCAAG
CR05-C3-700-041-A01-CT.F Mandarin fruit, development stadium (1 of 3) Citrus reticulata cDNA, mRNA sequence.
EY783669.1:534-557
GTTTTCATTTAGAAAGTGGGTTCAAGCTCC534ACTACTGATTCTGGCAAACCTGATGCTAATGGTCCTTCTGATCTGGAGTCCACC
PT11-C1-900-037-G11-CT.F Poncirus trifoliata leaf, greenhouse plant Citrus trifoliata cDNA, mRNA sequence.
EY813112.1:143-166
GGTTTTCATTTACAAGTTGGTTCAAGCTCC143ACTACTGATTCTGGCAAACCTGATGCTAATGGTTCTTCTGATCTGATGTCCCAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/atcaggtttgccagaatcagtagt
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : atcaggtttgccagaatcagtagt | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.090 | 0.081 | search_plus_done; http://172.18.8.135:50400/match?q=ATCAGGTTTGCCAGAATCAGTAGT&k=0&no_gap=0&offset=0&limit=50
0.305 | 0.216 | search_minus_done; http://172.18.8.135:50400/match?q=ACTACTGATTCTGGCAAACCTGAT&k=0&no_gap=0&offset=0&limit=49
0.308 | 0.002 | cgi_end;

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