GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-21 03:22:14, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Medicago truncatula chromosome 5 clone mte1-73d17, COMPLETE SEQUENCE.
CR954189.3:104297-104318
AATCCAGAAGCTGCAGCTCTTCTATGCTTT104297ATTGATTCCTCTGCGTCAAATTTCCTTTAACAAACTGTCAATTTTCTCTTTC
Medicago truncatula clone BAC MtQRRS1_F83005.5, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces.
JX457607.1:31935-31956
GAAAGAGAAAATTGACAGTTTGTTAAAGGA31935AATTTGACGCAGAGGAATCAATAAAGCATAGAAGAGCTGCAGCTTCTGGATT
Medicago truncatula clone mth2-21j3, complete sequence.
AC134049.24:103265-103286
GAAAGAGAAAATTGACAGTTTGTTAAAGGA103265AATTTGACGCAGAGGAATCAATAAAGCATAGAAGAGCTGCAGCTTCTGGATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/attgattcctctgcgtcaaatt
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : attgattcctctgcgtcaaatt | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.325 | 0.316 | search_plus_done; http://172.18.8.135:50400/match?q=ATTGATTCCTCTGCGTCAAATT&k=0&no_gap=0&offset=0&limit=50
0.356 | 0.031 | search_minus_done; http://172.18.8.135:50400/match?q=AATTTGACGCAGAGGAATCAAT&k=0&no_gap=0&offset=0&limit=49
0.357 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).