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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-12-18 07:30:56, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

CT168.complete Tomato Leaf cDNA from cv. VFNT cherry Solanum lycopersicum cDNA clone CT168, mRNA sequence.
AA824879.1:397-420
TAATTGGCRGMCACAAAGCATATGTAGTCG397TTAGTGAGGTACGCGATATGATTGAAAATGAAGATAATTTGTGACTTGAAGACA
EST262034 tomato susceptible, Cornell Solanum lycopersicum cDNA clone cLES14B2, mRNA sequence.
AI781155.1:428-451
TAATTGGCGGCCACAAAGCATATGTAGTCG428TTAGTGAGGTACGCGATATGATTGAAAATGAAGATAATTTGTGACTTGAAGACA
Solanum lycopersicum Micro-Tom DNA, chromosome 11, draft genome sequence.
AP028945.1:3239017-3239040
TAATTGGCGGCCACAAAGCATATGTAGTCG3239017TTAGTGAGGTACGCGATATGATTGAAAATGAAGATAATTTGTGACTTGAAGACA
Solanum lycopersicum cultivar I-3 chromosome 11.
CP023767.1:2655098-2655121
TAATTGGCGGCCACAAAGCATATGTAGTCG2655098TTAGTGAGGTACGCGATATGATTGAAAATGAAGATAATTTGTGACTTGAAGACA
Solanum pennellii chromosome ch11, complete genome.
HG975450.1:2722389-2722412
TAATTGGCGGCCACAAAGCATATGTAGTCG2722389TTAGTGAGGTACGCGATATGATTGAAAATGAAGATAATTTGTGACTTGAAGACA
Solanum lycopersicum chromosome ch11, complete genome.
HG975523.1:2655035-2655058
TAATTGGCGGCCACAAAGCATATGTAGTCG2655035TTAGTGAGGTACGCGATATGATTGAAAATGAAGATAATTTGTGACTTGAAGACA
Solanum lycopersicum TCONS_00170803 lncRNA gene, partial sequence.
MH895165.1:3794-3817
TAATTGGCGGCCACAAAGCATATGTAGTCG3794TTAGTGAGGTACGCGATATGATTGAAAATGAAGATAATTTGTGACTTGAAGACA
Solanum lycopersicum genome assembly, chromosome: 11.
OU640354.1:3032551-3032574
TAATTGGCGGCCACAAAGCATATGTAGTCG3032551TTAGTGAGGTACGCGATATGATTGAAAATGAAGATAATTTGTGACTTGAAGACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/caatcatatcgcgtacctcactaa
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : caatcatatcgcgtacctcactaa | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.254 | 0.245 | search_plus_done; http://172.18.8.135:50800/match?q=CAATCATATCGCGTACCTCACTAA&k=0&no_gap=0&offset=0&limit=50
0.371 | 0.116 | search_minus_done; http://172.18.8.135:50800/match?q=TTAGTGAGGTACGCGATATGATTG&k=0&no_gap=0&offset=0&limit=50
0.376 | 0.006 | cgi_end;

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