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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2024-11-22 10:10:41, GGGenome : DDBJ release 134.0, ENV division (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Candidatus Brocadia pituitae DNA, complete genome.
AP021856.1:2668524-2668538
ATATTCTTTGCCAGGATTAACAGGAACGAT2668524TTCATTGACAACATTTATACATTCATTACCTGGTTAAGCACGGCT
Metapenaeopsis lamellata majanivirus Hokkoku2021 DNA, complete genome.
AP027153.1:124723-124737
ATTATTGGTACTTCCTCAATATTTTTTTTG124723TTCATTGACAACATTTGTATGTTTTTATCCATTACATTATCTTTT
MAG: Candidatus Parvibacillus calidus isolate SSA7 chromosome.
CP058702.1:1416200-1416214
TTCCTTTTTGAGGTAAATCTCAGCAATACT1416200TTCATTGACAACATTCACTTNTTTGATATCACCTGCTTCTGTGTA
MAG: Nitrospira sp. isolate DJ chromosome.
CP058931.1:728121-728135
GGATTGCTGCACCATATGCCTATCGACCGA728121TTCATTGACAACATTTTCAACTTCCCGACTCTCGCCGAAACCTAC
MAG: Paracoccaceae bacterium isolate SSD4 chromosome, complete genome.
CP059263.1:1442910-1442924
TGGTGATGACCCGTCTCGGTCAGCTTCGGT1442910TTCATTGACAACATTTCCTTTCAACAAAAATAAAAAATCCCGCCT
MAG: bacterium isolate Aved_18-Q3-R54-62_BAT3C.16_uni chromosome, complete genome.
CP064960.1:1186415-1186429
TTCCGCGATCAAGGCCGTGATGTTTTGCTC1186415TTCATTGACAACATTTTCCGCTTTACCCAGGCGGGCTCGGAAGTG
MAG: Dehalococcoidia bacterium isolate bin423 chromosome.
CP070729.1:1158274-1158288
TTCTACTTTTATTAATCTCTCCTTTTCATC1158274TTCATTGACAACATTGTAGCAATCACGACGGTGCACAGTTATTCC
MAG: Planctomycetota bacterium isolate bin1080 chromosome.
CP070830.1:1864778-1864792
AGCGCTTTTGCCCTTCCGTATCGCTGTAAC1864778TTCATTGACAACATTTACAAAACCCGTCTCCGGCTCGACAACAAC
MAG: Chryseotalea sp. WA131a chromosome, complete genome.
CP073016.1:158792-158806
TTCATTAGTCAGTCGTGCGGTGGGGCATTT158792TTCATTGACAACATTTTCCACTTACACGACACTGAGCACACTCTT
MAG: Cyclobacteriaceae bacterium isolate TGS_BAC11 chromosome.
CP075525.1:3028633-3028647
CTGATCAACGCCAGCGAACGGCAGCGCGCA3028633TTCATTGACAACATTAAGCGTGACACCGAAGCACAGGAAGGCGCG
MAG: Oscillospiraceae bacterium isolate KR001_HIC_0044 chromosome, complete genome.
CP107214.1:1759907-1759921
TTTTCTTTTATGGAAAAGTTCACCATAATT1759907TTCATTGACAACATTATCCAAGTCCAAACAAAACTCTGTTGTCAG
MAG: Ferroplasma sp. isolate BR_04 chromosome, complete genome.
CP133597.1:1482829-1482843
ATCGCTGAGCTGCCCCAGCATCCTGCCCTT1482829TTCATTGACAACATTATAATTAGCCTCTTCTGGAATTGTTCCCAC
Uncultured Flavobacteriia bacterium.
FO117603.1:16462-16476
AGTTAATGGCATTGGTTACTGGGTTAATAT16462TTCATTGACAACATTCTCACAAATACCTGATAATGAGAATATAAA
Uncultured bacterium clone VISS18_097 genomic sequence, sequence.
KX158548.1:16462-16476
AGTTAATGGCATTGGTTACTGGGTTAATAT16462TTCATTGACAACATTCTCACAAATACCTGATAATGAGAATATAAA
MAG: Homavirus sp. clone Homavirus_44 genomic sequence.
MK072375.1:2043-2057
ACGATTAGGTGCGGCATTAAGAAAAAACAG2043TTCATTGACAACATTGGATTTGGAAGATAATTACTTCAATAGTGA
MAG: Caudoviricetes sp. isolate 87, complete genome.
MN855792.1:19506-19520
CTTTCCGGGCAAGACTTTACTAAGCTTGAC19506TTCATTGACAACATTGAAGCCGCTTTTGTTGATTCCGATTCGGAT
MAG: Bacteriophage sp. isolate 1365_125971, partial genome.
OP030941.1:31585-31599
TATCTTTAACTGCCATTGTACCTATATTAT31585TTCATTGACAACATTCTAACTTCTCTAATTTCTGTGACAACAGGA
Bryobacterales bacterium isolate d47adfd7-a82f-4c56-911c-b237267f53ff genome assembly, chromosome: 1.
OY729422.1:566789-566803
CGCGATGTCGAGGGACAGGACACGCTGCTG566789TTCATTGACAACATTTTTCGCTTTACCCAGGCGGGTTCGGAAGTT
uncultured Saccharicrinis sp. isolate 6d264618-48f0-4bb8-a3a8-b07b6cea3acc genome assembly, chromosome: 2.
OY760421.1:2287247-2287261
ACTATATACCTGATTCTCTAACTTTAAAAT2287247TTCATTGACAACATTATTTCTTTCAACTTCAGACTTAACTACACT
Bacteroidales bacterium isolate 6bac1f82-7b85-4efe-bce6-6a357ed6c494 genome assembly, chromosome: 2.
OY760434.1:5236828-5236842
GTTATCTGATGGCACAAAGGTTTATTTAAA5236828TTCATTGACAACATTAAGCTATCCTGTTCAATTTGATTCCAAAAT
uncultured Saccharicrinis sp. isolate b24d65bc-b787-4b08-bcc3-89705e2e545e genome assembly, chromosome: 1.
OY760657.1:591681-591695
ACTATATACCTGATTCTCTAACTTTAAAAT591681TTCATTGACAACATTATTTCTTTCAACTTCAGACTTAACTACACT
Caldilineaceae bacterium isolate 2dea1185-ec07-45c3-aea1-90064fdeb666 genome assembly, chromosome: 209.
OY761382.1:11997-12011
TTCCGGGATGAAGGGCGGGACGTCCTGCTG11997TTCATTGACAACATTTTCCGCTTTGTGCAGGCAGGCGCGGAAGTG
Desulfatiglandales bacterium isolate d5234fa8-f814-4557-af24-a28d4dae9633 genome assembly, chromosome: 4.
OY761470.1:988368-988382
CCGGAGAAGTTCCAACCTTTTGGCGATCAA988368TTCATTGACAACATTATAATAGCTCAGCACATCGGCCATGCCATC
Bacteroidaceae bacterium isolate c0e11543-1e2e-437f-8f47-60d7cdcd8e92 genome assembly, chromosome: 1.
OY761557.1:19887-19901
ATTCTTAGCATTCGAACAAACATTCAAGAA19887TTCATTGACAACATTACCAATGGGTGGTGCTAAAGGTGGATCTGA
uncultured Desulfobulbus sp. isolate 57af8870-89a5-447c-908d-f2db64e05d28 genome assembly, chromosome: 1.
OY762276.1:3549848-3549862
CATTAAATCCATTAAGCCCTAATCTTATTA3549848TTCATTGACAACATTATAAGGTATAGCTAAATGTAGCCCGTCGCC
uncultured Methanolobus sp. isolate 82c844d6-9b60-41bf-bd6e-2fdc373d5e6f genome assembly, chromosome: 2.
OY762426.1:1334194-1334208
AAGAGTACTTACAAGATCTCTGACAGCAGT1334194TTCATTGACAACATTGTCACCACCATCAAGGAAGCGCGCACTGAA
Bacteroidaceae bacterium isolate 6278f434-0448-4bf6-ab69-65f278ddeab7 genome assembly, chromosome: 12.
OY762877.1:470208-470222
ATTCTTAGCATTCGAACAAACATTCAAGAA470208TTCATTGACAACATTACCAATGGGTGGTGCTAAAGGTGGATCCGA
Christensenellaceae bacterium isolate c6a5e122-909e-4aed-a635-5b19112204bb genome assembly, chromosome: 1.
OY762936.1:183945-183959
ATCGTATGGGGTTCTGTGCTCTTCTCCGCC183945TTCATTGACAACATTCCATACGTGGCTACCATGTTGCCCGTGGTC
uncultured Fusibacter sp. isolate 09a0c790-c096-42bb-b34c-29f3d5964584 genome assembly, chromosome: 6.
OY762972.1:242856-242870
ACCGTCTTTCGTATATCTCAATTCACCATT242856TTCATTGACAACATTGAAAAAGTGATCGCCACTAATAGCAATATC
uncultured Saccharicrinis sp. isolate e4f3df5d-a459-421c-8471-c5220a80581e genome assembly, chromosome: 2.
OY763045.1:325100-325114
ACTATATACCTGATTCTCTAGCTTTAAAAT325100TTCATTGACAACATTATTTCTTTCAACTTCAGACTTAACTACACT
uncultured Methanolobus sp. isolate ac794f53-cb0e-4bbe-a7ce-f3218f4774c6 genome assembly, chromosome: 1.
OY763421.1:2493171-2493185
GAGAGTGCTTACAAGATCCCTGACAGCAGT2493171TTCATTGACAACATTATCCTTGCCATCAAGGAAGCGTGCACTGAA
Bacteroidaceae bacterium isolate 6568f4fe-af97-4e14-b4b0-a353dda3ccae genome assembly, chromosome: 1.
OY764215.1:4245866-4245880
ATTCTTAGCATTCGAACAAACATTCAAGAA4245866TTCATTGACAACATTACCAATGGGTGGTGCTAAAGGTGGATCTGA
Candidatus Latescibacteria bacterium isolate 3219b954-e10d-4382-8a72-06d1161b35cc genome assembly, chromosome: 8.
OY764352.1:428381-428395
CTCGAGCGACGCGCTGAACGGCTCATAGAA428381TTCATTGACAACATTGAGCCACTTGTAGTTACCCGCCTCAACCTT
uncultured Methanolobus sp. isolate 63462039-51cf-4655-9c85-af1f4e349c88 genome assembly, chromosome: 2.
OY771309.1:97977-97991
GAGAGTACTGACAAGGTCACGAACTGCTGT97977TTCATTGACAACATTATCCCCGCCATCAAGGAAACGTGCACTGAA
Christensenellaceae bacterium isolate 810d6d61-b0c4-42bb-bd3a-0296a85592aa genome assembly, chromosome: 1.
OY776378.1:483471-483485
ATAGGAGTAATCCTAACAGCAGCACTACCA483471TTCATTGACAACATTTTAGAGAGCATAATCCCTATAGCACTGCAC
uncultured Bacteroides sp. isolate e8262fac-f17a-4b50-8549-1af79aa9de9b genome assembly, chromosome: 1.
OY782578.1:18350-18364
ATTCTTAGCATTCGAACAAACATTCAAGAA18350TTCATTGACAACATTACCAATGGGTGGTGCTAAAGGTGGATCTGA
Bacteroidales bacterium isolate 29af8000-aa9b-4969-9261-ea2c593eb5de genome assembly, chromosome: 1.
OY820914.1:4584778-4584792
AGCGGTGGCGGACAGACCAAGATCCTCCAT4584778TTCATTGACAACATTCATGTGATCAAGGATAATGTATTCCCGGTC
Anaerolineaceae bacterium isolate 592c0b7d-ec24-4628-ad55-941c30eb369b genome assembly, chromosome: 2.
OY821647.1:166291-166305
GGCATAAAGCCCTACAAACGTAGGGTTTTT166291TTCATTGACAACATTTTCTGGTAGAGTATCATTGAATTATGAGCA
MAG: Sphingobacteriales bacterium isolate Kalu_18-Q3-R12-55_MAXAC.067_cln chromosome, complete genome.
CP064999.1:2536900-2536914
GAAGATTTACCCATTTTAAATGAGTTGGGT2536900AATGTTGTCAATGAAAACACAGCCACCCGTCGGGATTTTCTAAAA
MAG: Thermoplasmata archaeon isolate bin983 chromosome.
CP070629.1:1625417-1625431
TATACCTTCGGGGGCGTGGGTTCCGGCGGG1625417AATGTTGTCAATGAATTATACGAGTATAATCCCGCAATGGATACC
MAG: Dehalococcoidia bacterium isolate bin708 chromosome.
CP070676.1:1163898-1163912
GGAATAACTGTTCACCGCCGCGATTGCTAC1163898AATGTTGTCAATGAAGAGGAAAAGGAGAGGCTGATAAAAGTGGAG
MAG: Candidatus Heimdallarchaeota archaeon isolate bin6 chromosome.
CP070695.1:309616-309630
CGGATCAAATATTTTTTTTTTCAGCTACAA309616AATGTTGTCAATGAATTATTACAATTTTCTCAGCTTTCGTATAAC
MAG: Candidatus Bathyarchaeota archaeon isolate bin519 chromosome.
CP070709.1:1115267-1115281
GCAAACTTGCATATTCCCCTCACAAAAAAC1115267AATGTTGTCAATGAACCGCGTTATTTAAACATTTCTTTTGGTGCT
MAG: Nitrospiraceae bacterium isolate bin398 chromosome.
CP070737.1:452733-452747
ATTGAAGTTCTGTACAGCCCTTATCCTGAC452733AATGTTGTCAATGAATTTTGAGACTTTTGCCTGATCCTGTTCATC
MAG: Lentisphaeria bacterium isolate nC33_lr_bin.207.fa chromosome.
CP091727.1:937032-937046
GCGCGGATGGCGCGTCAACTCAACGAAAGG937032AATGTTGTCAATGAATCAGTCCGCCTTCTCCGCCGTTACCGACCG
MAG: Candidatus Persebacteraceae bacterium AB1(2) chromosome, complete genome.
CP136751.1:827054-827068
GCATTCCGTTCCGGCCAAGGTAAAGCGATA827054AATGTTGTCAATGAACAAAAGCACATCCCGCCCTTCATCACGAAA
Uncultured stramenopile clone AA3F14RJ1F12 18S ribosomal RNA gene, partial sequence.
GU823247.1:964-978
GTTAACGAACGAGACCTTAGCCTGCTAAAT964AATGTTGTCAATGAATATTCATTGGCAGCGTTTCTTAGAGGGACA
Uncultured marine thaumarchaeote KM3_70_D07 genomic sequence.
KF901029.1:9827-9841
TGACCACGTGGGCTCACAACGCTTGCAAGA9827AATGTTGTCAATGAACCACTTCCAGTACCAATTTCAACAATTTTT
Saccharomyces kudriavzevii genome assembly, chromosome: 10.
LR215944.1:468222-468236
TGGTTACTTAATAAGTCATTTTGCTGTAGC468222AATGTTGTCAATGAAGTAAGTTCCGCAAGTAAAGTGGTGTTGAAA
MAG: Fisa-like virus clone V17D19D1 polyprotein gene, partial cds.
MG571973.1:1051-1065
CCCCTYGAACGAACAAAGGAATATTATGAG1051AATGTTGTCAATGAAGTTCTCTGTCGTGATCAGGAGCATGTCACT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj134env/TTCATTGACAACATT
lang : en | db : ddbj134env | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.356 | 0.347 | search_plus_done; http://172.18.8.136:50412/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.432 | 0.076 | search_minus_done; http://172.18.8.136:50412/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=12
0.440 | 0.008 | cgi_end;

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