GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2026-04-24 16:06:30, GGGenome : DDBJ release 139.0, PRI division (Sep, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Pan troglodytes BAC clone CH251-643N11 from chromosome 7, complete sequence.
AC188940.3:129735-129749
TATATTTGTTATAGAATATTATGTTAAATC129735TTCATTGACAACATTAAAGAGTCATACCTTTTATGGGTGTTAGTT
Pan troglodytes BAC clone CH251-639B17 from chromosome 7, complete sequence.
AC192004.3:189879-189893
GTGGTGCCTGGCCTGAGTCAGCTCAGTAGC189879TTCATTGACAACATTGGTTCGTTTAACAAATATTGCCTGAGAAGA
Macaca mulatta BAC CH250-327F20 () complete sequence.
AC202850.6:193298-193312
GTGAGCCACCACACCGGCCTATCTTAGCTT193298TTCATTGACAACATTAGTATAATGTTAACAGCTCTCCTAAGGGAG
Macaca fascicularis isolate 582-1 chromosome 19.
CP141343.1:48197141-48197155
GTGAGCCACCATGCTGGCCTATCTTAGCTT48197141TTCATTGACAACATTAGTATAATGTTAACAGCTCTCCTAAGGGAA
Macaca fascicularis isolate 582-1 chromosome 17.
CP141345.1:58402558-58402572
TGTTCAAAGTTTTCCCCTCCAATGTATCTT58402558TTCATTGACAACATTCGGATTTATCACATCAATCAGTCAATAAAT
Macaca fascicularis isolate 582-1 chromosome 17.
CP141345.1:75227124-75227138
GCAGTCTGGAGGTTCTCCCTGGAGGCTGTA75227124TTCATTGACAACATTGCCTGAGGTAACTCACACTGAGGTGACAAC
Macaca fascicularis isolate 582-1 chromosome 16.
CP141346.1:14178525-14178539
GCCTCTGGGCCTATATTAGATGGGCCATGC14178525TTCATTGACAACATTGATTTTATGTTTATTTGTGAAAGGGCAGAA
Macaca fascicularis isolate 582-1 chromosome 5.
CP141357.1:153808592-153808606
CAGAATATATTATCGCTTTGAACACAGATT153808592TTCATTGACAACATTTTGTGGGCATCCATTTAATATTAATATTAA
Macaca fascicularis isolate 582-1 chromosome 5.
CP141357.1:170703559-170703573
TAAAACCTCTGATTTTGTGTAACACTCCTT170703559TTCATTGACAACATTAAACAGCAATTAACTATTTGCTGACTACAT
Macaca fascicularis isolate 582-1 chromosome 5.
CP141357.1:186236156-186236170
TTTGGACCCCCAGATCAGTCTTCATATTCT186236156TTCATTGACAACATTCATGAAGTTCTGCAGAAATTAGATAGAATT
Macaca fascicularis isolate 582-1 chromosome 5.
CP141357.1:191035028-191035042
GCCTGAGCCACCATGCCCAGCTTGCTATTC191035028TTCATTGACAACATTCACTTAAACAAACAAACATCCATAAAATTA
Macaca fascicularis complete genome, chromosome chr2.
LT160001.1:79404853-79404867
ACTATGCTGCACTCCAAATACTATTGTGTT79404853TTCATTGACAACATTCCCTATTACATATGCATATGAAAAACAGGC
Pan troglodytes BAC clone RP43-41C9 from chromosome 7, complete sequence.
AC145986.2:137372-137386
TCTACAGATTTTGGATTTACCAGCCCCCAC137372AATGTTGTCAATGAATTCCTTAAAATCTCTCTCTCACTGTCTCTC
Pan troglodytes BAC clone RP43-156P2 from chromosome 7, complete sequence.
AC147061.3:141344-141358
AACTAACACCCATAAAAGGTATGACTCTTT141344AATGTTGTCAATGAAGATTTAACATAATATTCTATAACAAATATA
Pan troglodytes BAC clone CH251-50E4 from chromosome 7, complete sequence.
AC189126.2:167589-167603
TCTTCTCAGGCAATATTTGTTAAACGAACC167589AATGTTGTCAATGAAGCTACTGAGCTGACTCAGGCCAGGCACCAC
Pan troglodytes BAC clone CH251-649M9 from chromosome 19, complete sequence.
AC194534.4:153222-153236
CTCCCTTAGGAGAGCTGTTAACATTATACT153222AATGTTGTCAATGAAAAAGCTAAGATAGGCCGGGTGTGGTGGCTT
Pongo abelii BAC clone CH276-41K3 from chromosome 8, complete sequence.
AC200433.3:108392-108406
AATCTAGCCTTGAAAGCCCCTTCCAGAGCC108392AATGTTGTCAATGAAGCTTTCCCTGCTGAATGATAGCTCTCTGGG
Rhesus Macaque BAC CH250-475D9 () complete sequence.
AC202848.5:135471-135485
CTCCCTTAGGAGAGCTGTTAACATTATACT135471AATGTTGTCAATGAAAAGCTAAGATAGGCCGGTGTGGTGGCTCAC
Macaca mulatta BAC CH250-327F20 () complete sequence.
AC202850.6:34848-34862
CTCCCTTAGGAGAGCCGTTAACATTATACT34848AATGTTGTCAATGAAAAAGCTAAGATAGGCAGGGCGTGGTGGCTC
Macaca mulatta BAC CH250-447E21 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence.
AC203030.6:127521-127535
ACTCCCTTAGGAGAGCTGTAACATTATACT127521AATGTTGTCAATGAAAAGCTAAGACAGGCCAGGGGTGGTGGCTCA
Pan troglodytes chromosome 19 clone CH251-349D9, complete sequence.
AC275687.1:143541-143555
CTCCCTTAGGAGAGCTGTTAACATTATACT143541AATGTTGTCAATGAAAAAGCTAAGATAGGCCGGGTGTGGTGGCTT
Gorilla gorilla chromosome 19 clone CH277-16B22, complete sequence.
AC275733.1:94470-94484
CTCCCTTAGGAGAGCTGTTAGCATTATACT94470AATGTTGTCAATGAAAAAGCTAAGATAGGCCAGGCATGGTGGCTC
Macaca fascicularis isolate 582-1 chromosome 19.
CP141343.1:47988394-47988408
ACTCCCTTAGGAGAGCTGTAACATTATACT47988394AATGTTGTCAATGAAAAGCTAAGACAGGCCAGGGGTGGTGGCTCA
Macaca fascicularis isolate 582-1 chromosome 19.
CP141343.1:48039516-48039530
CTCCCTTAGGAGAGCCGTTAACATTATACT48039516AATGTTGTCAATGAAAAAGCTAAGATAGGCAGGGCGTGGTGGCTC
Macaca fascicularis isolate 582-1 chromosome 14.
CP141348.1:23967550-23967564
GAATGCTTAAAATAATGGCTCCACAACTTT23967550AATGTTGTCAATGAAAAGAGTTAAACTCTGTAAAATATTTGAAGA
Macaca fascicularis isolate 582-1 chromosome 14.
CP141348.1:41113298-41113312
GTTTGCTCTATTCACTGTCCTCAACGCTAG41113298AATGTTGTCAATGAACAAGACATATCTATGTTCCTGGAAACTCAA
Macaca fascicularis isolate 582-1 chromosome 11.
CP141351.1:85969400-85969414
GTAAGATAGGTTTGTTCCAGAAGTTTAAAA85969400AATGTTGTCAATGAATTTGATAAAATTTAATATTCACATTAGAAG
Macaca fascicularis isolate 582-1 chromosome 4.
CP141358.1:140669586-140669600
TGGAAATTAAACATCAAAATTCTGATCGAC140669586AATGTTGTCAATGAAGAAATCACAAGAGAAATTAGGACGTCTTCT
Macaca fascicularis isolate 582-1 chromosome 2.
CP141360.1:120288827-120288841
GCCTGTTTTTCATATGCATATGTAATAGGG120288827AATGTTGTCAATGAAAACACAATAGTATTTGGAGTGCAGCATAGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj139pri/TTCATTGACAACATT
lang : en | db : ddbj139pri | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.080 | 0.071 | search_plus_done; http://172.18.8.138:50902/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.093 | 0.012 | search_minus_done; http://172.18.8.138:50902/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=38
0.105 | 0.012 | cgi_end;

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