GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2024-10-31 01:17:46, GGGenome : Budgerigar genome, WUSTL v6.3/melUnd1 (Sep, 2011)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

JH556497:1431701-1431715
TCTGAAACCATCCTTTCTCTACAAGTCAGC1431701TTCATTGACAACATTTCTTTAAGCTTTCCTGTAATGATAAAGTGG
JH556597:6183201-6183215
AACCTATATTTAACTAATAGATTTTTCTAT6183201TTCATTGACAACATTTTGTGACTGGCAGAACAGTCACAATATATT
JH556598:9578140-9578154
TCTGTCTTCTAATGTAAAGATAATTAATAT9578140TTCATTGACAACATTTTGTTATTGGCAAAACTGTCAATAATGTGA
JH556604:13875555-13875569
AATGAGCTCATGTTCCCAGGTGGGACTATC13875555TTCATTGACAACATTTTGATTCACTGGCAATTTCAGTCAGACTTC
JH556616:7473129-7473143
ATGAAAAGAGATGCTTTGATGAGCAACAAG7473129TTCATTGACAACATTTTAATTTTCTGTTGTTTTTTTAATGACTTT
JH556469:1825137-1825151
GAACAATGGAAACGAGCTATGGATTATTTA1825137AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
JH556564:3974638-3974652
AGTCTTTTGTTTTGGCCTGGACATGGGCAT3974638AATGTTGTCAATGAATAGGACTGTTGTAGCTTCTAAGGGTGTCTT
JH556610:18080331-18080345
ATTCTTTTAAGAAGTGAGCTATATTGCTCA18080331AATGTTGTCAATGAATGAAGTGAAATAGGTGCTCTAGTCACTGAG
JH556617:35250344-35250358
TATTCAAATGTTGCCTCTTCTGTGTCAAAG35250344AATGTTGTCAATGAAACAGGTATAAAACTTCAAGCACTCTTGGGA
JH556627:4601475-4601489
AGTAACAGATCACACTTTGTTTTCAGAATG4601475AATGTTGTCAATGAATAAGCCTTAAGTGGATGGGTGTATTTGAAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/melUnd1/TTCATTGACAACATT
lang : en | db : melUnd1 | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.081 | 0.072 | search_plus_done; http://172.18.8.76:28071/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.085 | 0.004 | search_minus_done; http://172.18.8.76:28071/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=45
0.086 | 0.001 | cgi_end;

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