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データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2024-11-22 23:06:29, GGGenome : Platypus genome, ASM227v2/ornAna2 (Feb, 2007)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

chr7:10300979-10300993
TAGACTCAAACACAATAAAATCATACTTAT10300979AATGTTGTCAATGAAATTTAAGACACCATTGCAAGTTTCTGCATT
chr12:15581192-15581206
CTGAGGAAGTGATCCAGTTATGAACCCATG15581192AATGTTGTCAATGAATCATGGACTAAAGCAGAGAGACCTAGAATC
chrUn_DS181637v1:3296920-3296934
GTACAAGGTGAAAAATTTTCTTGCCAGAAC3296920AATGTTGTCAATGAAACCACAGCTGGCCAGCTTCACCCGAATGAT
chrUn_DS205068v1:4376-4390
CTTTTATTCCAAACTTATTTTTGTAAGGGG4376AATGTTGTCAATGAATCATGGCACACATGGTTTGTATATTTGTGG
chrUn_DS188537v1:6692-6706
CCCAAAGAGCTGACTATTTGTAGATACAAT6692TTCATTGACAACATTTTGATCTTTGAACAGAAAAGAACTCCAAAA
chrUn_DS203120v1:2460-2474
CATTGGGTAGATACAATCAAGGAAACAGAA2460TTCATTGACAACATTCAACTCTGTGTCCTAATTGGTGTTCCTTTT
chrUn_DS181181v1:296194-296208
GCAACTAAATAGAATCGAGGCGATGTACAA296194TTCATTGACAACATTGATAGGGTGAAGAAAATATAAACAAGTGGG
chrUn_DS181354v1:1487358-1487372
TCCTTTCCAGGCATCTGATTTTGTGTATGG1487358TTCATTGACAACATTGGAGGAACTTCAAGAAATTGGATTTGTCTT
chrUn_DS181354v1:1489156-1489170
TCCTTTCCAGGCATCTGATTTTGTGTATGG1489156TTCATTGACAACATTGGAGGAACTTCAAGAAATTGGATTTGTCTT
chrUn_DS180881v1:1285044-1285058
TTTTAAAACTATTTTATGAGGCTATTCATT1285044TTCATTGACAACATTTTAAGTACAAATATGACACAGCCCTATAGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ornAna2/AATGTTGTCAATGAA
lang : ja | db : ornAna2 | k : 0 | strand : | nogap : | query_string : AATGTTGTCAATGAA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.078 | 0.069 | search_plus_done; http://172.18.8.77:28769/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=50
0.083 | 0.005 | search_minus_done; http://172.18.8.77:28769/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=46
0.084 | 0.001 | cgi_end;

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