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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2024-11-24 01:30:08, GGGenome : RefSeq complete RNA release 90 (Sep, 2018)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

PREDICTED: Pantholops hodgsonii diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), mRNA
XM_005960302.1:3424-3438
GAACAGTGGAAACGAGCTATGGATTATTTA3424AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Leptonychotes weddellii diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X1, mRNA
XM_006728302.1:2641-2655
GAACAGTGGAAACGAGCTATGGATTACTTA2641AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTAATCATG
PREDICTED: Leptonychotes weddellii diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X2, mRNA
XM_006728303.1:2596-2610
GAACAGTGGAAACGAGCTATGGATTACTTA2596AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTAATCATG
PREDICTED: Leptonychotes weddellii diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X3, mRNA
XM_006728304.1:2596-2610
GAACAGTGGAAACGAGCTATGGATTACTTA2596AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTAATCATG
PREDICTED: Leptonychotes weddellii diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X4, mRNA
XM_006728305.1:3047-3061
GAACAGTGGAAACGAGCTATGGATTACTTA3047AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTAATCATG
PREDICTED: Leptonychotes weddellii diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X5, mRNA
XM_006728306.1:3047-3061
GAACAGTGGAAACGAGCTATGGATTACTTA3047AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTAATCATG
PREDICTED: Leptonychotes weddellii diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X6, mRNA
XM_006728307.1:3047-3061
GAACAGTGGAAACGAGCTATGGATTACTTA3047AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTAATCATG
PREDICTED: Saccoglossus kowalevskii hamartin-like (LOC100378717), mRNA
XM_002734995.2:1510-1524
GAATTAAAAAAGACCAGTGCTGAGTTGTTT1510AATGTTGTCAATGAACTTGAAGATTTGAAAGAGAAAGCAGCAATG
PREDICTED: Saccoglossus kowalevskii rho-associated protein kinase 2-like (LOC100371856), mRNA
XM_006812503.1:1452-1466
GGAAGCACGTAACAAAGCTTTACAGGTGGA1452AATGTTGTCAATGAAACAAAAAGAAGCCAAACTATCATCAGATTT
PREDICTED: Elephantulus edwardii diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X1, mRNA
XM_006900681.1:2572-2586
GAACAGTGGAAACGAGCTATGGATTATTTA2572AATGTTGTCAATGAACTCAACTACATGACCCAAATTGTTATCATG
PREDICTED: Elephantulus edwardii diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X2, mRNA
XM_006900682.1:2575-2589
GAACAGTGGAAACGAGCTATGGATTATTTA2575AATGTTGTCAATGAACTCAACTACATGACCCAAATTGTTATCATG
PREDICTED: Elephantulus edwardii diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X3, mRNA
XM_006900683.1:2578-2592
GAACAGTGGAAACGAGCTATGGATTATTTA2578AATGTTGTCAATGAACTCAACTACATGACCCAAATTGTTATCATG
PREDICTED: Chrysochloris asiatica diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X1, mRNA
XM_006872311.1:2849-2863
GAACAATGGAAACGAGCTATGGATTATTTA2849AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Chrysochloris asiatica diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X2, mRNA
XM_006872312.1:2856-2870
GAACAATGGAAACGAGCTATGGATTATTTA2856AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Balaenoptera acutorostrata scammoni diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X1, mRNA
XM_007191826.1:3062-3076
GAACAGTGGAAACGAGCTATGGATTATTTA3062AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Balaenoptera acutorostrata scammoni diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X2, mRNA
XM_007191827.1:3113-3127
GAACAGTGGAAACGAGCTATGGATTATTTA3113AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Balaenoptera acutorostrata scammoni diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X3, mRNA
XM_007191828.1:3059-3073
GAACAGTGGAAACGAGCTATGGATTATTTA3059AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Balaenoptera acutorostrata scammoni diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X4, mRNA
XM_007191829.1:3062-3076
GAACAGTGGAAACGAGCTATGGATTATTTA3062AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Balaenoptera acutorostrata scammoni diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X5, mRNA
XM_007191830.1:3062-3076
GAACAGTGGAAACGAGCTATGGATTATTTA3062AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Balaenoptera acutorostrata scammoni diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X6, mRNA
XM_007191831.1:3062-3076
GAACAGTGGAAACGAGCTATGGATTATTTA3062AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Balaenoptera acutorostrata scammoni diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X7, mRNA
XM_007191832.1:3062-3076
GAACAGTGGAAACGAGCTATGGATTATTTA3062AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Balaenoptera acutorostrata scammoni diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X8, mRNA
XM_007191833.1:3062-3076
GAACAGTGGAAACGAGCTATGGATTATTTA3062AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Balaenoptera acutorostrata scammoni diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X9, mRNA
XM_007191834.1:3062-3076
GAACAGTGGAAACGAGCTATGGATTATTTA3062AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Balaenoptera acutorostrata scammoni diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X10, mRNA
XM_007191835.1:3062-3076
GAACAGTGGAAACGAGCTATGGATTATTTA3062AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Balaenoptera acutorostrata scammoni diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X11, mRNA
XM_007191836.1:3062-3076
GAACAGTGGAAACGAGCTATGGATTATTTA3062AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Balaenoptera acutorostrata scammoni diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X12, mRNA
XM_007191837.1:3062-3076
GAACAGTGGAAACGAGCTATGGATTATTTA3062AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Balaenoptera acutorostrata scammoni diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X16, misc_RNA
XR_451909.1:3062-3076
GAACAGTGGAAACGAGCTATGGATTATTTA3062AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Balaenoptera acutorostrata scammoni diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X13, mRNA
XM_007191838.1:3062-3076
GAACAGTGGAAACGAGCTATGGATTATTTA3062AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Balaenoptera acutorostrata scammoni diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X14, mRNA
XM_007191839.1:3062-3076
GAACAGTGGAAACGAGCTATGGATTATTTA3062AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Balaenoptera acutorostrata scammoni diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X15, mRNA
XM_007191840.1:3062-3076
GAACAGTGGAAACGAGCTATGGATTATTTA3062AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Lipotes vexillifer diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X1, mRNA
XM_007449903.1:2572-2586
GAACAGTGGAAACGAGCTATGGATTATTTA2572AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Lipotes vexillifer diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X2, mRNA
XM_007449904.1:2581-2595
GAACAGTGGAAACGAGCTATGGATTATTTA2581AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Lipotes vexillifer diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X3, mRNA
XM_007449905.1:2584-2598
GAACAGTGGAAACGAGCTATGGATTATTTA2584AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Orycteropus afer afer diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X1, mRNA
XM_007942491.1:2856-2870
GAACAATGGAAACGAGCTATGGATTATTTA2856AATGTTGTCAATGAACTCAACTACATGACTCAAATTGTTATCATG
PREDICTED: Orycteropus afer afer diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X2, mRNA
XM_007942492.1:2572-2586
GAACAATGGAAACGAGCTATGGATTATTTA2572AATGTTGTCAATGAACTCAACTACATGACTCAAATTGTTATCATG
PREDICTED: Orycteropus afer afer diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X3, mRNA
XM_007942493.1:2856-2870
GAACAATGGAAACGAGCTATGGATTATTTA2856AATGTTGTCAATGAACTCAACTACATGACTCAAATTGTTATCATG
PREDICTED: Calypte anna diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), mRNA
XM_008492815.1:2602-2616
GAACAGTGGAAACGAGCTATGGATTATTTA2602AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
Plasmodium vinckei vinckei hypothetical protein partial mRNA
XM_008627354.1:2188-2202
AACTTTGACTTTGCACCGAATGAGGTAGAC2188AATGTTGTCAATGAAAATGAACAGAATGAAGGTGAACAAAATGAG
PREDICTED: Merops nubicus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), partial mRNA
XM_008945234.1:2177-2191
GAACAATGGAAACGAGCAATGGATTATTTA2177AATGTTGTCAATGAACTCAATTACATGACACAGATTGTCATCATG
PREDICTED: Pygoscelis adeliae Kv channel interacting protein 4 (KCNIP4), transcript variant X3, mRNA
XM_009324066.1:238-252
TATAGAGGTTTCAAGAATGAAGATCCTTCA238AATGTTGTCAATGAAGAAACCTTCAAAGAGATTTACTCTCAGTTC
PREDICTED: Pygoscelis adeliae Kv channel interacting protein 4 (KCNIP4), transcript variant X4, mRNA
XM_009324067.1:226-240
TATAGAGGTTTCAAGAATGAAGATCCTTCA226AATGTTGTCAATGAAGAAACCTTCAAAGAGATTTACTCTCAGTTC
PREDICTED: Pelecanus crispus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), mRNA
XM_009487957.1:2863-2877
GAACAATGGAAACGAGCTATGGATTATTTA2863AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Nipponia nippon diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), mRNA
XM_009462394.1:2602-2616
GAACAATGGAAACGAGCTATGGATTATTTA2602AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Cuculus canorus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), mRNA
XM_009559909.1:2602-2616
GAACAGTGGAAACGAGCTATGGATTATTTA2602AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Fulmarus glacialis diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X1, mRNA
XM_009574587.1:2602-2616
GAACAATGGAAACGAGCTATGGATTATTTA2602AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Fulmarus glacialis diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X2, mRNA
XM_009574588.1:2602-2616
GAACAATGGAAACGAGCTATGGATTATTTA2602AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Egretta garzetta diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), mRNA
XM_009648641.1:2837-2851
GAACAATGGAAACGAGCTATGGATTATTTA2837AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Cariama cristata inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2-like (LOC104155152), partial mRNA
XM_009707050.1:835-849
GAACAATGGAAACGAGCTATGGATTATTTA835AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Nicotiana sylvestris uncharacterized LOC104240473 (LOC104240473), mRNA
XM_009795319.1:444-458
TTAGTGTTTTTTGGGGGCTAAAACTAAGTT444AATGTTGTCAATGAAGCTGTAAGGATATCACTCCTTGTGTGACAA
PREDICTED: Nicotiana sylvestris putative pentatricopeptide repeat-containing protein At5g37570 (LOC104247474), mRNA
XM_009803497.1:1173-1187
GCCCAATGAAGCTCTCAAAATTTTCCATGA1173AATGTTGTCAATGAATGTTAGGCCAGATGAGTTTATAATGGTAAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/refseq90/AATGTTGTCAATGAA
lang : en | db : refseq90 | k : 0 | strand : | nogap : | query_string : AATGTTGTCAATGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.120 | 0.111 | search_plus_done; http://172.18.8.74:28003/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=50
0.156 | 0.036 | search_minus_done; http://172.18.8.74:28003/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=0
0.156 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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