GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2024-11-25 20:04:21, GGGenome : Rhesus spliced RNA, RefSeq on Mmul_10/rheMac10, D3G 24.03 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

XR_001445025.2|LOC106998534;106998534|chr5:146514149:146527572:-|spliced::chr5:146514149-146527572(-)
position: 218-232
TTAATATTAATATTAAATGGATGCCCACAA218AATGTTGTCAATGAAAATCTGTGTTCAAAGCGATAATATATTCTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/rheMac10_RefSeq_spliced_d3g2403/AATGTTGTCAATGAA
lang : en | db : rheMac10_RefSeq_spliced_d3g2403 | k : 0 | strand : | nogap : | query_string : AATGTTGTCAATGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.081 | 0.072 | search_plus_done; http://172.18.8.77:28989/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=50
0.085 | 0.004 | search_minus_done; http://172.18.8.77:28989/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=49
0.085 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).