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データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2024-11-22 12:56:01, GGGenome : Rhesus genome, Mmul_10/rheMac10, D3G 23.02 (Feb, 2023)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

chr5
position: 146527341-146527355
CAGAATATATTATCGCTTTGAACACAGATT146527341TTCATTGACAACATTTTGTGGGCATCCATTTAATATTAATATTAA
chr5
position: 163209068-163209082
TAAAACCTCTGATTTTGTGTAACACTCCTT163209068TTCATTGACAACATTAAACAGCAATTAACTATTTGCTGACTACAT
chr5
position: 178769009-178769023
TTTGGACCCCCAGATCAGTCTTCATATTCT178769009TTCATTGACAACATTCATGAAGTTCTGCAGAAATTAGATAGAATT
chr5
position: 183557954-183557968
GCCTGAGCCACCATGCCCAGCTTGCTATTC183557954TTCATTGACAACATTCACTTAAACAAACAAACATCCATAAAATTA
chr16
position: 13890825-13890839
GCCTCTGGGCCTATATTAGATGGGCCATGC13890825TTCATTGACAACATTGATTTTATGTTTATTTGTGAAAGGGCAGAA
chr17
position: 49200745-49200759
TGTTCAAAGTTTTCCCCTCCAATGTATCTT49200745TTCATTGACAACATTCGGATTTATCACATCAATCAGTCAATAAAT
chr17
position: 66037760-66037774
GCAGTCTGGAGGTTCTCCCTGGAGGCTGTA66037760TTCATTGACAACATTGCCTGAGGTAACTCACACTGAGGTGACAAC
chr19_NW_021160375v1_random
position: 158477-158491
GTGAGCCACCACGCCGGCCTATCTTAGCTT158477TTCATTGACAACATTAGTATAATGTTAACAGCTCTCCTGGCAATG
chr2
position: 113358661-113358675
GCCTGTTTTTCATATGCATATGTAATAGGG113358661AATGTTGTCAATGAAAACACAATAGTATTTGGAGTGCAGCATAGT
chr11
position: 78709330-78709344
GTAAGATAGGTTTGTTCCAGAAGTTTAAAA78709330AATGTTGTCAATGAATTTGATAAAATTTAATATTCACATTAGAAG
chr14
position: 41003831-41003845
GTTTGCTCTATTCACTGTCCTCAACGCTAG41003831AATGTTGTCAATGAACAAGACATATCTATGTTCCTGGAAACTCAA
chr19
position: 40093681-40093695
ACTCCCTTAGGAGAGCTGTAACATTATACT40093681AATGTTGTCAATGAAAAGCTAAGACAGGCCAGGGGTGGTGGCTCA
chr19
position: 40144780-40144794
CTCCCTTAGGAGAGCCGTTAACATTATACT40144780AATGTTGTCAATGAAAAAGCTAAGATAGGCAGGGCGTGGTGGCTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/rheMac10_d3g2302/TTCATTGACAACATT
lang : ja | db : rheMac10_d3g2302 | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.083 | 0.074 | search_plus_done; http://172.18.8.78:28953/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.092 | 0.009 | search_minus_done; http://172.18.8.78:28953/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=42
0.096 | 0.004 | cgi_end;

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