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Database:

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 06:27:34, GGGenome : Hedgehog genome, EriEur2.0/eriEur2 (May, 2012)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

JH835304:3674957-3674971
TTAATATTAATATTAAATGGATGCCCACAG3674957AATGTTGTCAATGAAAATCTGTGTTTTAAGCGATAATATATTCTA
JH835342:4986515-4986529
CTTCCTAGCACGCAGAACTGAGGAAAATCA4986515AATGTTGTCAATGAATGGAATAATAAGAAGAGTGTTTTGAAACAA
JH835423:2566087-2566101
AATTGATCAGATCACTCAGCAACAACAAGA2566087AATGTTGTCAATGAAAGTCTAGAAAAATAATGTTAACAATTTCCA
JH835434:575422-575436
AGAGTTAGGTCCTTGAATAAGATTTCATAT575422AATGTTGTCAATGAAAAAAAAAAAAGGAATCTTAGCCATGCTGAA
JH835604:763060-763074
GAACAGTGGAAACGTGCTATGGATTATTTA763060AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
JH835682:102696-102710
ACACATACGTACATACATATTTGCTCAGTG102696AATGTTGTCAATGAATGAGCATCTTCATTTTGTGTAAGAAGATTC
JH835689:527283-527297
TACAGGTCATGTGCTATTGCTCAGAGACTT527283AATGTTGTCAATGAAGAGGCATTTAGCTCAGATGAAAACCTGTTG
JH835812:602063-602077
TTTTAGCTTGATATATATAAATATAATGTT602063AATGTTGTCAATGAAAAATTAATTGTACAAAGAAGTGTAAGTTTA
JH836152:432656-432670
TATTTAATTGATATTTACAATTCTGCTCTT432656AATGTTGTCAATGAAGAGTAAATGCATTAAAATCTCTTTTATTGC
JH836480:286022-286036
TGTCACTTTCTCTTTATGAGACAAAGTATC286022AATGTTGTCAATGAAGTAAATGCAATTTTCCTCACTTCCAATCAC
JH835341:1906322-1906336
CCTGTCACAGATTCTATATTCTGCTCATTG1906322TTCATTGACAACATTTTGGCAACCAGGGTGAGGGAAGGTTTGTCT
JH835401:2258974-2258988
TCCCTAAGAAATTTCTGGAAGGGCTCACCG2258974TTCATTGACAACATTTGCCCAGGAAAGGGGGCCAAGGCTGGGTGT
JH835518:1896128-1896142
ATCATACGGGTGAAGCTGGCCAGCTGCGGA1896128TTCATTGACAACATTGTTCTGGCCCGGAAGTTCTTCACGCTCTAC
JH835740:985842-985856
TCTGGATTGCTAAAGATACCTCCCTCTATA985842TTCATTGACAACATTAATAATATCTCATGAACATCTTCTATTTAA
JH835760:705738-705752
AACTCCCCCACTGATACTTTTTAATATATA705738TTCATTGACAACATTTTCAAAAGATTTACTTGATAGAGACTGAAA
JH836029:101438-101452
CTCTCTGTACCTTTCTCTGTATATCTACCT101438TTCATTGACAACATTGGAAACAGAGTTGGCAGTCAGCTGAGGTAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

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