GGGenome Help | Japanese

Database:

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2020-12-04 10:22:26, GGGenome : Fragaria vesca genome, v2.0.a1 (Dec, 2014)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Fvb6:6937296-6937310
GTCGTCTTACTTGGGACAGCCGCTTCCATT6937296TTCATTGACAACATTGATCTGGATCGAGGTTCTGGTGATCGGCTA
Fvb2:20022789-20022803
GATTTGGACATGGGGAAGGCCAGGAATTCT20022789AATGTTGTCAATGAACAGCATGACCATTCACCATCACTTGGAATG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : http://gggenome.dbcls.jp/fragaria_vesca_v2.0.a1/TTCATTGACAACATT
lang : en | db : fragaria_vesca_v2.0.a1 | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug :

0.007 | 0.007 | search_start;
0.078 | 0.071 | search_plus_done; http://172.18.8.72:28272/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.082 | 0.004 | search_minus_done; http://172.18.8.72:28272/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=49
0.082 | 0.001 | cgi_end;

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