# [ GGGenome | 2024-11-22 15:25:26 ] # database: Human pre-spliced RNA, RefSeq curated protein coding on hg38.p12, D3G 20.03 (Mar, 2020) # query: AATGTTGTCAATGAA # count: 11 # query: TTCATTGACAACATT # count: 7 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins NM_001135805.2|SYT1|chr12:78863981:79452008:+|prespliced + 243533 243547 TAGATGAATACAAAAGTATAAAATATATACCAACAAGGTATTTCCAATAATACATTAATGTATTGATGACATAAGATAGGTTTGTTCCAGAAGTTTAAAAAATGTTGTCAATGAATTTGATAAAGTTTAATATTCACATTAAAAGTATTACCGTTAAAACCAAAATATAGCATACTTATTCTCTCCATTATTTTGGAATAAGAAAAAATTATTCT 243433 243647 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_001291901.2|SYT1|chr12:78864773:79452008:+|prespliced + 242741 242755 TAGATGAATACAAAAGTATAAAATATATACCAACAAGGTATTTCCAATAATACATTAATGTATTGATGACATAAGATAGGTTTGTTCCAGAAGTTTAAAAAATGTTGTCAATGAATTTGATAAAGTTTAATATTCACATTAAAAGTATTACCGTTAAAACCAAAATATAGCATACTTATTCTCTCCATTATTTTGGAATAAGAAAAAATTATTCT 242641 242855 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_005639.3|SYT1|chr12:78864773:79452008:+|prespliced + 242741 242755 TAGATGAATACAAAAGTATAAAATATATACCAACAAGGTATTTCCAATAATACATTAATGTATTGATGACATAAGATAGGTTTGTTCCAGAAGTTTAAAAAATGTTGTCAATGAATTTGATAAAGTTTAATATTCACATTAAAAGTATTACCGTTAAAACCAAAATATAGCATACTTATTCTCTCCATTATTTTGGAATAAGAAAAAATTATTCT 242641 242855 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_001135806.2|SYT1|chr12:79045691:79452008:+|prespliced + 61823 61837 TAGATGAATACAAAAGTATAAAATATATACCAACAAGGTATTTCCAATAATACATTAATGTATTGATGACATAAGATAGGTTTGTTCCAGAAGTTTAAAAAATGTTGTCAATGAATTTGATAAAGTTTAATATTCACATTAAAAGTATTACCGTTAAAACCAAAATATAGCATACTTATTCTCTCCATTATTTTGGAATAAGAAAAAATTATTCT 61723 61937 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_016836.4|RBMS1|chr2:160272150:160493807:-|prespliced + 127190 127204 CATCACTTTAGGAATAAGAACTCAATTCTGCCCTTTCAGAGTGTTCTGAAGGGATGTGTGCATGTGCATAAAGTTCCAAAGTAAATTTGCATTATATGCTAATGTTGTCAATGAATAGAATATAAATGTGCTTCTTTGCTGCAATTACACTAACTCACTAAGTAAGAAAGCACTAATTTTAAAACAAGGAGCCAGAAGCACTGTATAGTGCAAAG 127090 127304 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_002897.5|RBMS1|chr2:160272150:160493807:-|prespliced + 127190 127204 CATCACTTTAGGAATAAGAACTCAATTCTGCCCTTTCAGAGTGTTCTGAAGGGATGTGTGCATGTGCATAAAGTTCCAAAGTAAATTTGCATTATATGCTAATGTTGTCAATGAATAGAATATAAATGTGCTTCTTTGCTGCAATTACACTAACTCACTAAGTAAGAAAGCACTAATTTTAAAACAAGGAGCCAGAAGCACTGTATAGTGCAAAG 127090 127304 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_001080448.3|EPHA6|chr3:96814593:97761532:+|prespliced + 545885 545899 ACTCCACTATCTTTACAGAATTCTCTGTATAATGATATTTGGTATTTTATTTCAGATTTGATGAAAACATAATTTGAATATTAATTTTAAAATTTATTCAAATGTTGTCAATGAACATTGTCAGACATTTTGCAGCATTTCTTTATATTGTTTAAAATTTTGTGGTCAGGATAAATTTTATTCCTTTCTTTTTCTTTAATTTTGTGTCTGGTTTG 545785 545999 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_001350622.1|KHDRBS2|chr6:61679959:62286227:-|prespliced + 287903 287917 GAAAATCTCATTTTGCTAGAGGGAATCAAATGTCTTCCAGACACCTTTGACTGAATTTTTCAGGAGTGTAAGAAATAGCAACTTATTATAGTATGAGTAAAATGTTGTCAATGAAGTATGATTACAAGATGGTTGATTGAAATAGTTGTTCAGTGAATTAATTCAATTTCTTCTCACTCTTTAAAATTGCCTTAATTAAACTGCATTAAAGATTT 287803 288017 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_152688.4|KHDRBS2|chr6:61679960:62286225:-|prespliced + 287901 287915 GAAAATCTCATTTTGCTAGAGGGAATCAAATGTCTTCCAGACACCTTTGACTGAATTTTTCAGGAGTGTAAGAAATAGCAACTTATTATAGTATGAGTAAAATGTTGTCAATGAAGTATGATTACAAGATGGTTGATTGAAATAGTTGTTCAGTGAATTAATTCAATTTCTTCTCACTCTTTAAAATTGCCTTAATTAAACTGCATTAAAGATTT 287801 288015 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_133468.5|BMPER|chr7:33904914:34156427:+|prespliced + 214035 214049 TTCTGCCAGCAGATCACCATCATGAAATGCAGCGTCACCTCTTGCCTGGGTCTCTAGCCTGCCAGGCTACTCTACAGATTTTGGATTTACCAGCCCCCACAATGTTGTCAATGAATTCCTTAAAATCTCTCTCTCTCTCTCTCTCACTGTCTCTCTCTCTCTCTCTCACACACACACACACACACACACGCACTCGATACGATGACACATATACA 213935 214149 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_001365308.1|BMPER|chr7:33905538:34156427:+|prespliced + 213411 213425 TTCTGCCAGCAGATCACCATCATGAAATGCAGCGTCACCTCTTGCCTGGGTCTCTAGCCTGCCAGGCTACTCTACAGATTTTGGATTTACCAGCCCCCACAATGTTGTCAATGAATTCCTTAAAATCTCTCTCTCTCTCTCTCTCACTGTCTCTCTCTCTCTCTCTCACACACACACACACACACACACGCACTCGATACGATGACACATATACA 213311 213525 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_001304840.3|HECW2|chr2:196194071:196362177:-|prespliced - 149028 149042 ACTATTAACATTGGCTCCACAAAGAATAAAAGTACATTCGGAGGGAAAAAATTAAAAGAACTTAATTGCATGACAGTATAGTTATATGAGAAGCAACTTCTTCATTGACAACATTGTCATCACCCTTAATGAAATGTGGGGCATTACTTAGGTGTAAAAAAAGATCTGTAAAATTGGTTCTGGCCTAAAGAGATTCTTTTATATTATCAAGTCCA 148928 149142 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 NM_020760.4|HECW2|chr2:196194071:196592983:-|prespliced - 379834 379848 ACTATTAACATTGGCTCCACAAAGAATAAAAGTACATTCGGAGGGAAAAAATTAAAAGAACTTAATTGCATGACAGTATAGTTATATGAGAAGCAACTTCTTCATTGACAACATTGTCATCACCCTTAATGAAATGTGGGGCATTACTTAGGTGTAAAAAAAGATCTGTAAAATTGGTTCTGGCCTAAAGAGATTCTTTTATATTATCAAGTCCA 379734 379948 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 NM_001348768.2|HECW2|chr2:196194071:196593554:-|prespliced - 380405 380419 ACTATTAACATTGGCTCCACAAAGAATAAAAGTACATTCGGAGGGAAAAAATTAAAAGAACTTAATTGCATGACAGTATAGTTATATGAGAAGCAACTTCTTCATTGACAACATTGTCATCACCCTTAATGAAATGTGGGGCATTACTTAGGTGTAAAAAAAGATCTGTAAAATTGGTTCTGGCCTAAAGAGATTCTTTTATATTATCAAGTCCA 380305 380519 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 NM_014296.3|CAPN7|chr3:15206245:15252916:+|prespliced - 42038 42052 TAAATAAATAAATAAAAATAAAAAAATAAAAACACATTATAAAGGGGGCAATCCAGATGGCCAGTAAACCATTGTAATAGCCAGAAATTGGAAACATATATTCATTGACAACATTTAAGATTATAATATAGTCATATAATAGTCCTGATATAACAATGGAAATAAATTACAGCTACACACAACATAATGGATAAGTCTTAAAAAGCCACATGTAC 41938 42152 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 NM_152744.4|SDK1|chr7:3301251:4269000:+|prespliced - 222790 222804 TCTGTACATTCTCCTTTGAGTCTGGATCCTTGATCCTGGCCTGTGATTCCATCTCAGGAGTTAGAAGCCTGTGGTGCCTGGCCTGAGTCAGCTCATTAGCTTCATTGACAACATTGGTTCGTTCAACAAATATTGCCTGAGAAGAAGACATTTAAGCAAAGACCTGCAGGAAGGAAGGGAGTTAACTAAGTGGATATGTGGGGCAAGAACTTCCC 222690 222904 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 NM_012301.4|MAGI2|chr7:78017054:79453667:-|prespliced - 731566 731580 TACAATTTCCTAGATTAAACAATACATTCAAATGAGGTAATGAATTATGTGTTTTAAGAGCAGAATGAGCTATATTTGTTATAGAATATTATGTTAAATCTTCATTGACAACATTAAAGAGTCATACCTTTTATGGGTGTTAGTTAATTACGTATACTTATTTCCTTGGAACAAGATATATTTTACAAATAAAAAAGTTTTTCTATAATATTTTG 731466 731680 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 NM_001301128.2|MAGI2|chr7:78017054:79453667:-|prespliced - 731566 731580 TACAATTTCCTAGATTAAACAATACATTCAAATGAGGTAATGAATTATGTGTTTTAAGAGCAGAATGAGCTATATTTGTTATAGAATATTATGTTAAATCTTCATTGACAACATTAAAGAGTCATACCTTTTATGGGTGTTAGTTAATTACGTATACTTATTTCCTTGGAACAAGATATATTTTACAAATAAAAAAGTTTTTCTATAATATTTTG 731466 731680 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0