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2025-04-07 07:31:53, GGGenome : Aegilops tauschii genome, ASM34733v1 (Dec, 2013)
Summary:
Results:
検索語に色がつきます(ミスマッチ ・挿入 欠失) 。
検索結果のうち50件までを表示しています。
Scaffold179330 dna:supercontig supercontig:GCA_000347335.1:Scaffold179330:1:235:1
position: 73-87
ATGTTCTTCTGGTGTCCTTGAATATACCAG73 AATGTTGTCAATGAA CACCACAACAAATTTGTCCATGAATTTCAT
Scaffold94266 dna:supercontig supercontig:GCA_000347335.1:Scaffold94266:1:16541:1
position: 7657-7671
ATGAACAAGTTTGTGTTGGGGGAAGGCAAG7657 AATGTTGTCAATGAA AACACAGTCATCGAGGGGCAAGGATGGTAT
Scaffold186768 dna:supercontig supercontig:GCA_000347335.1:Scaffold186768:1:23378:1
position: 8874-8888
TAGTACAAAATACTCAGCCTTTCTGCGGCA8874 AATGTTGTCAATGAA TAAACGAAGAGAATAGACAAGATTCCAGAC
Scaffold6481 dna:supercontig supercontig:GCA_000347335.1:Scaffold6481:1:61797:1
position: 40938-40952
CCGCCTTGGTGCACTCGACGCGGCGTGGTC40938 AATGTTGTCAATGAA CGACTTCCATCGGAAGAGTACTGTACGTGG
Scaffold40041 dna:supercontig supercontig:GCA_000347335.1:Scaffold40041:1:82371:1
position: 17244-17258
AACATCCGTGAAGAGACGCTTTCAGTTTTG17244 AATGTTGTCAATGAA AAGATGTATAATAAAATGGGTGATCAGTTC
Scaffold76296 dna:supercontig supercontig:GCA_000347335.1:Scaffold76296:1:82425:1
position: 33692-33706
TATCATTGTTCAAACCGACTCATCGGAAGC33692 AATGTTGTCAATGAA GGGGGACAGTCTTTGGTTTTCTACTTATGA
Scaffold73785 dna:supercontig supercontig:GCA_000347335.1:Scaffold73785:1:33658:1
position: 15354-15368
GAAACATGGTCATCATATGTTACGACATTT15354 TTCATTGACAACATT GACATGTGAGTTCATTTTTAAGTTAATGGA
Scaffold48936 dna:supercontig supercontig:GCA_000347335.1:Scaffold48936:1:34801:1
position: 11230-11244
AAAGTAGCCCGTTGGTCTGCCATGTATTAG11230 TTCATTGACAACATT CTGTACAGAAAAAGGCCGAACGGTGTGAAA
Scaffold35412 dna:supercontig supercontig:GCA_000347335.1:Scaffold35412:1:49007:1
position: 24359-24373
ATTATCAAACATTGATGAAGGCATTTTGGG24359 TTCATTGACAACATT TGAATTTGACCCTAGTTGAGTTCATTTGGT
Scaffold35412 dna:supercontig supercontig:GCA_000347335.1:Scaffold35412:1:49007:1
position: 32618-32632
ATTATCAAACATTGATGAAGGCATTTTGGG32618 TTCATTGACAACATT TGAATTTGACCCTAGTTGAGTTCATTTGGT
Scaffold26145 dna:supercontig supercontig:GCA_000347335.1:Scaffold26145:1:55800:1
position: 54942-54956
ATGAAATTCATGGACAAATTTGTGGTGGTA54942 TTCATTGACAACATT CTGGTTTACTCGAGGACACCAGAAGAGCAT
Data Export:
下記のフォーマットで最大100000件まで検索結果を取得できます。
Debug Info:
Redirect URI : https://gggenome.dbcls.jp /ja/ASM34733v1/AATGTTGTCAATGAA
lang : ja |
db : ASM34733v1 |
k : 0 |
strand : |
nogap : |
query_string : AATGTTGTCAATGAA |
format : html |
download : |
debug :
0.008 | 0.008 | search_start;
0.082 | 0.073 | search_plus_done; http://172.18.8.75:28166/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=50
0.092 | 0.010 | search_minus_done; http://172.18.8.75:28166/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=44
0.095 | 0.003 | cgi_end;
GGGenome by
@meso_cacase at
DBCLS
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