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2025-04-08 00:10:15, GGGenome : Aedes aegypti genome, AaegL3 (Dec, 2013)
Summary:
Results:
検索語に色がつきます(ミスマッチ ・挿入 欠失) 。
検索結果のうち50件までを表示しています。
supercont1.1295 dna:supercontig supercontig:AaegL3:supercont1.1295:1:143593:1
position: 91031-91045
AATCTCCTTCTGATCGTTCAAAATTCGTAG91031 TTCATTGACAACATT TGATAAAAACAGCCACTAAAAAAGGATATT
supercont1.541 dna:supercontig supercontig:AaegL3:supercont1.541:1:819817:1
position: 292038-292052
TTGATCAAAAAACAATAACTGATCGATGTT292038 TTCATTGACAACATT TACAGGATGAAACCAAAAGGTGCTAAAAAG
supercont1.67 dna:supercontig supercontig:AaegL3:supercont1.67:1:3004230:1
position: 668459-668473
ATGATCAAAAAACAATAACTGATCGATGTT668459 TTCATTGACAACATT TACAGGATGAAACCTAAAGGTGCTAAAAAG
supercont1.36 dna:supercontig supercontig:AaegL3:supercont1.36:1:3595646:1
position: 3456408-3456422
CATCAATTTATCTCAGTATATAAAAGACGG3456408 TTCATTGACAACATT TTTTTTCTCGCTAAGAAAGAGGAGATTGTT
supercont1.1 dna:supercontig supercontig:AaegL3:supercont1.1:1:5856339:1
position: 1593639-1593653
AACAACTTTCAAAACACCTAATTTCAGTTT1593639 TTCATTGACAACATT TAAAGATCATTACCGATATTTGAATGTTTG
supercont1.1312 dna:supercontig supercontig:AaegL3:supercont1.1312:1:135540:1
position: 33451-33465
TGCCAAAAATCTTTGGAATATCATGATAAT33451 AATGTTGTCAATGAA GTTGTATAGTGGCCGTTCATTAATAACGCA
supercont1.457 dna:supercontig supercontig:AaegL3:supercont1.457:1:950089:1
position: 470034-470048
CTTTTTAGCACCTTTTGGTTTCATCCTGTA470034 AATGTTGTCAATGAA AACATCGATTAGTTATTATTTTTTGATCAA
supercont1.315 dna:supercontig supercontig:AaegL3:supercont1.315:1:1341213:1
position: 184620-184634
CTTTTGTTGTAGAATCGTGATGTAAGGTCA184620 AATGTTGTCAATGAA CCTTTGTTATACTCTGCGGATTCCTAGTTG
supercont1.85 dna:supercontig supercontig:AaegL3:supercont1.85:1:2749456:1
position: 596593-596607
TACCTCAGAACCAGCTTGGGTGAAACGGAA596593 AATGTTGTCAATGAA GAGCAGCACATCCTGTCCTTCCTGATCACG
supercont1.69 dna:supercontig supercontig:AaegL3:supercont1.69:1:2946165:1
position: 134132-134146
TACCTCGGAACCGGCCTGGGTGAAACGGAA134132 AATGTTGTCAATGAA GAGCAGCACATCCTGTCCCTCTTGATCGCG
supercont1.13 dna:supercontig supercontig:AaegL3:supercont1.13:1:4376253:1
position: 1297560-1297574
AACGGCCAAAGCAGTTCAAAGATCTCTGCA1297560 AATGTTGTCAATGAA AATTGAACGCAGTATTTTCGATGCACTTTT
Data Export:
下記のフォーマットで最大100000件まで検索結果を取得できます。
Debug Info:
Redirect URI : https://gggenome.dbcls.jp /ja/AaegL3/TTCATTGACAACATT
lang : ja |
db : AaegL3 |
k : 0 |
strand : |
nogap : |
query_string : TTCATTGACAACATT |
format : html |
download : |
debug :
0.009 | 0.009 | search_start;
0.082 | 0.073 | search_plus_done; http://172.18.8.76:28132/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.090 | 0.007 | search_minus_done; http://172.18.8.76:28132/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=45
0.094 | 0.004 | cgi_end;
GGGenome by
@meso_cacase at
DBCLS
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