GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2024-11-22 04:07:54, GGGenome : Ciona intestinalis genome, KH (Jul, 2008)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

KhC3
position: 2582474-2582488
ATAAATTAGAACTTATAAAAGTTATTAATA2582474AATGTTGTCAATGAACCACCTATGTTAAACACAAACCTAAAACGT
KhL61
position: 35053-35067
GGGCATGATGAGATGACACCGCATCACATT35053AATGTTGTCAATGAAAAACGCAAGTATAGAAAGTGGAATAGTGCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/KH/TTCATTGACAACATT
lang : en | db : KH | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.082 | 0.073 | search_plus_done; http://172.18.8.77:28231/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.085 | 0.003 | search_minus_done; http://172.18.8.77:28231/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=50
0.087 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).