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2025-04-08 04:53:28, GGGenome : Musa acuminata genome, MA1 (Aug, 2012)
Summary:
Results:
検索語に色がつきます(ミスマッチ ・挿入 欠失) 。
検索結果のうち50件までを表示しています。
1 dna:chromosome chromosome:MA1:1:1:27573629:1
position: 23858587-23858601
TGGTGTATAAGTACAATTTGTATATAATGA23858587 AATGTTGTCAATGAA TATGAATTAATGTATCATGTAAAAGCTTTA
4 dna:chromosome chromosome:MA1:4:1:30051516:1
position: 25133131-25133145
TCTTTTGAACAGAGAGTATGCCCCATTAAG25133131 AATGTTGTCAATGAA ATTGACCCCAGTGAGTTGCATGAGATCCTT
5 dna:chromosome chromosome:MA1:5:1:29377369:1
position: 24212756-24212770
ATAATGACTACGGTTGCTCATGTTTCAAAC24212756 AATGTTGTCAATGAA GAGAAACTTAATTATTTTATTAGGACATCA
8 dna:chromosome chromosome:MA1:8:1:35439739:1
position: 6565042-6565056
ATCCCAAGTCAGACTCCCATCAATCAGAAC6565042 AATGTTGTCAATGAA CAATATACAGCACAGAAGTTCAATGATGAT
9 dna:chromosome chromosome:MA1:9:1:34148863:1
position: 18365428-18365442
TGTTGTATAAGCATATTTTGTATGTAATGA18365428 AATGTTGTCAATGAA TCAAAATGGATATACTGTGTAAAAGTGTTA
10 dna:chromosome chromosome:MA1:10:1:33665772:1
position: 4533677-4533691
TGTTGTATAAGTATATTTTGTGTGTAATGA4533677 AATGTTGTCAATGAA CCGAAATGGATATACCTTATAAAAATGTTA
10 dna:chromosome chromosome:MA1:10:1:33665772:1
position: 8717064-8717078
TTGTTATATAAGTGCATTTGTATCTAATGA8717064 AATGTTGTCAATGAA TAATTGTTGTATAATGTAAAAGTAAAGCTT
chrUn_random dna:chromosome chromosome:MA1:chrUn_random:1:141147818:1
position: 1763091-1763105
TATAAGTGCATTTTATATGAAATGAAATGA1763091 AATGTTGTCAATGAA TCTGAATTGATACATTGTGTAAAAGTGTTA
chrUn_random dna:chromosome chromosome:MA1:chrUn_random:1:141147818:1
position: 63840866-63840880
TGTTGTATAAGCATATTTTATATGTAATGA63840866 AATGTTGTCAATGAA TCGAAATGGTTATACTGTGTAAAAGTGTTA
chrUn_random dna:chromosome chromosome:MA1:chrUn_random:1:141147818:1
position: 66350704-66350718
TGTTGTATAAGAATATTTGGTATGTAATGA66350704 AATGTTGTCAATGAA TCGAAATGGATATACCTTGTAAAAGTGTTA
chrUn_random dna:chromosome chromosome:MA1:chrUn_random:1:141147818:1
position: 79355150-79355164
TGTTGTATAAGCATATTTTGTATGAAATGA79355150 AATGTTGTCAATGAA TCGAAATGGATATACTATGTAAAAGTGTTA
chrUn_random dna:chromosome chromosome:MA1:chrUn_random:1:141147818:1
position: 103841615-103841629
TGTTGTATAAGCATATTTTGTATGTAATGA103841615 AATGTTGTCAATGAA TCGAAATGGATATACTATGTAAAAGTGTTA
chrUn_random dna:chromosome chromosome:MA1:chrUn_random:1:141147818:1
position: 128737657-128737671
TATGGTATAAGCATATTTTGTATGTAATGA128737657 AATGTTGTCAATGAA CCAAAATGGATATATCTTGTAAAAGTGTTA
2 dna:chromosome chromosome:MA1:2:1:22054697:1
position: 221480-221494
TAACACTTTTACAAGGTATATCCATTTCAG221480 TTCATTGACAACATT TCATTACATACAAAATATGCTTATACAACA
3 dna:chromosome chromosome:MA1:3:1:30470407:1
position: 24998806-24998820
TGAGTAAAAGTAGTTCCCAGTAACAGTCAT24998806 TTCATTGACAACATT GATTCCATAAATTTTGCTTCTTTCTCAGTG
6 dna:chromosome chromosome:MA1:6:1:34899179:1
position: 9193103-9193117
GAACTCGTAGCGTATACTAACTACATTGTT9193103 TTCATTGACAACATT AGTCCACCAGATCCTTCTTTCAAGACCGCA
10 dna:chromosome chromosome:MA1:10:1:33665772:1
position: 12672301-12672315
TAACACTTTTATATGGTATATCCATTTTGA12672301 TTCATTGACAACATT TCATAACGTACAAAATATGCTTATACAATA
chrUn_random dna:chromosome chromosome:MA1:chrUn_random:1:141147818:1
position: 28896843-28896857
TAACACTTTTACATAATATATCCATTCAGA28896843 TTCATTGACAACATT GTCATTACATAAAGAATATGCTTATTCAAC
chrUn_random dna:chromosome chromosome:MA1:chrUn_random:1:141147818:1
position: 73198684-73198698
TAACACTTTTACCTAGTATATCCATTTCGA73198684 TTCATTGACAACATT TTATTTCATACAAAATATGCTTATACAACA
chrUn_random dna:chromosome chromosome:MA1:chrUn_random:1:141147818:1
position: 107206998-107207012
TAACACTTTTACACAGTATATCCATTTCGA107206998 TTCATTGACAACATT TCATTACATACAAAATATGCTTATACAACA
chrUn_random dna:chromosome chromosome:MA1:chrUn_random:1:141147818:1
position: 126508316-126508330
TAACACTTTTACATAGTATATCCATTTCGA126508316 TTCATTGACAACATT TCATTTCATATAAAATATGCTTATACAATA
Data Export:
下記のフォーマットで最大100000件まで検索結果を取得できます。
Debug Info:
Redirect URI : https://gggenome.dbcls.jp /ja/MA1/AATGTTGTCAATGAA
lang : ja |
db : MA1 |
k : 0 |
strand : |
nogap : |
query_string : AATGTTGTCAATGAA |
format : html |
download : |
debug :
0.009 | 0.009 | search_start;
0.079 | 0.071 | search_plus_done; http://172.18.8.75:28180/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=50
0.092 | 0.012 | search_minus_done; http://172.18.8.75:28180/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=37
0.097 | 0.005 | cgi_end;
GGGenome by
@meso_cacase at
DBCLS
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