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データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2024-12-27 17:35:55, GGGenome : Medicago truncatula str. A17 genome, MedtrA17_4.0 (Jun, 2014)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

5 dna:chromosome chromosome:GCA_000219495.2:5:1:43630510:1
position: 6083058-6083072
ATTTGAAGGATGGGAGAAAGCAGAAGCTGA6083058AATGTTGTCAATGAAGGAACATCTCGAGGAATCTATACACCAGGA
7 dna:chromosome chromosome:GCA_000219495.2:7:1:49172423:1
position: 18450513-18450527
GTTAGCCTGTATTTTTGATAGGCTATAATA18450513AATGTTGTCAATGAATTTTGACTTAGACTTTGAAAAGAAGTTAAT
8 dna:chromosome chromosome:GCA_000219495.2:8:1:45569985:1
position: 25396405-25396419
ACTATAGAGAAACAAGTATAACAAACAGAC25396405AATGTTGTCAATGAAAATATCTTACCCTCCAAGTTGTTGCCAATA
4 dna:chromosome chromosome:GCA_000219495.2:4:1:56582383:1
position: 27812701-27812715
CTTTAACTCCCTTCAAAATATGAATCAAAC27812701TTCATTGACAACATTTATTGTAGCATGTCGAAAATACATGTTTTT
scaffold0070 dna:supercontig supercontig:GCA_000219495.2:scaffold0070:1:66121:1
position: 53123-53137
TGGTGGTAACCAGCTTTCAGGTAAGATTTT53123TTCATTGACAACATTGTCTGTTTATTATACTGGTTTCTCTATAGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/MedtrA17_4.0/AATGTTGTCAATGAA
lang : ja | db : MedtrA17_4.0 | k : 0 | strand : | nogap : | query_string : AATGTTGTCAATGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.082 | 0.073 | search_plus_done; http://172.18.8.75:28179/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=50
0.088 | 0.006 | search_minus_done; http://172.18.8.75:28179/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=47
0.090 | 0.001 | cgi_end;

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