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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2021-10-26 02:50:23, GGGenome : Melitaea cinxia genome, MelCinx1.0 (Jul, 2014)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

scaffold4438 dna:scaffold scaffold:MelCinx1.0:scaffold4438:1:10243:1
position: 283-297
ATTCTAAAAAGTACTAAACGAATTAAATAA283TTCATTGACAACATTACTAAGAAGACGGCTTTAGTATATGGTGCG
scaffold4363 dna:scaffold scaffold:MelCinx1.0:scaffold4363:1:42275:1
position: 39222-39236
TTTCTGTTTAGTGAAGTTGCATTGAATGTA39222TTCATTGACAACATTGAAAATAGCTTTTATTAAAATACTAACTGT
scaffold5697 dna:scaffold scaffold:MelCinx1.0:scaffold5697:1:43761:1
position: 15691-15705
CGTGACCAGGAGGGACAAGATGTACTGCTC15691TTCATTGACAACATTTTCCGTTTTACTCAGGCTGGTTCTGAGGTA
scaffold916 dna:scaffold scaffold:MelCinx1.0:scaffold916:1:135557:1
position: 16597-16611
AGTTAGTAAGTAATACAGCAACAAGTTGGA16597AATGTTGTCAATGAAATTGAAACTGTTGCATTCAGTGTAGGCTTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : http://gggenome.dbcls.jp/ja/MelCinx1.0/TTCATTGACAACATT
lang : ja | db : MelCinx1.0 | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug :

0.007 | 0.007 | search_start;
0.079 | 0.072 | search_plus_done; http://172.18.8.76:28151/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.084 | 0.005 | search_minus_done; http://172.18.8.76:28151/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=47
0.085 | 0.001 | cgi_end;

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