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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2021-04-23 03:09:45, GGGenome : Oryza meridionalis genome, Oryza_meridionalis_v1.3 (Oct, 2014)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

7 dna:chromosome chromosome:Oryza_meridionalis_v1.3:7:1:26849004:1
position: 20956664-20956678
AGATCTATCTAATTTAGGTGTAGTGCTCTC20956664TTCATTGACAACATTTTTCACTTCCTGCGTTAGGTTTCCATTATC
9 dna:chromosome chromosome:Oryza_meridionalis_v1.3:9:1:18641908:1
position: 13109302-13109316
CTTTCAAATGATGGTCAAACTAATTATAAA13109302TTCATTGACAACATTAACTAAACGAGTGAAGAGTGAAAAGATGAG
5 dna:chromosome chromosome:Oryza_meridionalis_v1.3:5:1:26596109:1
position: 25059153-25059167
TCTTGCATAAATTACCTGAGTGAAACGGAA25059153AATGTTGTCAATGAACAAAAGCACATCTTGTCCTTCGGCATCACG
10 dna:chromosome chromosome:Oryza_meridionalis_v1.3:10:1:17741381:1
position: 2674026-2674040
CATGGTTTTGAACATAGCCACCCTGTAAGA2674026AATGTTGTCAATGAAAATGATACTCGAGGGAATACAACACTAAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : http://gggenome.dbcls.jp/ja/Oryme_v1.3/TTCATTGACAACATT
lang : ja | db : Oryme_v1.3 | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug :

0.007 | 0.007 | search_start;
0.078 | 0.071 | search_plus_done; http://172.18.8.75:28186/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.082 | 0.004 | search_minus_done; http://172.18.8.75:28186/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=48
0.083 | 0.001 | cgi_end;

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