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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2022-01-18 15:45:50, GGGenome : Oryza nivara genome, AWHD00000000 (Aug, 2013)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

3 dna:chromosome chromosome:AWHD00000000:3:1:36134596:1
position: 10246666-10246680
TGATCCCAATAGTTGTTTATTTTTGGACTC10246666TTCATTGACAACATTGCCACTTTGATGACTGTTCTGACATGAATG
6 dna:chromosome chromosome:AWHD00000000:6:1:29411429:1
position: 3359431-3359445
TCCTGATGTCCGACGTGTGGATAAGACCTG3359431TTCATTGACAACATTCTCTTGTTTGTACCGATTCATGGCTTGCTC
7 dna:chromosome chromosome:AWHD00000000:7:1:24717764:1
position: 9221547-9221561
CGTGTGCCTCCTGGATGCACCAATCGGCTG9221547TTCATTGACAACATTTTGTTGAAGGACCTTGGCAACATCTTTTTG
7 dna:chromosome chromosome:AWHD00000000:7:1:24717764:1
position: 18603273-18603287
AGATCTATCTAATTTAGGTGTAGTGCTCTC18603273TTCATTGACAACATTTTTCACTTCCTGCGTTAGGTTTCCATTATC
9 dna:chromosome chromosome:AWHD00000000:9:1:20407407:1
position: 13516691-13516705
CTTTCAAATGATGGTCAAACTAATTATAAA13516691TTCATTGACAACATTAACTAAACGAGTGAAGAGTGAAGAGAAGAT
5 dna:chromosome chromosome:AWHD00000000:5:1:28014461:1
position: 7684826-7684840
TATGATTGAGCACCCCTACCTACTTTGCAA7684826AATGTTGTCAATGAACTGTTTGTTCGCTACATAAATGTTCAATGA
5 dna:chromosome chromosome:AWHD00000000:5:1:28014461:1
position: 25222964-25222978
TCTTGCATAAATTACCTGAGTGAAACGGAA25222964AATGTTGTCAATGAACAAAAGCACATCTTGTCCTTCGGCATCACG
10 dna:chromosome chromosome:AWHD00000000:10:1:21549876:1
position: 3857723-3857737
CCTCCATAAGCAATGCCTCTTTTCCCTATC3857723AATGTTGTCAATGAATGTTTTAGGCAGCTGCAAAGTGCACATGTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : http://gggenome.dbcls.jp/ja/Oryni/TTCATTGACAACATT
lang : ja | db : Oryni | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.079 | 0.071 | search_plus_done; http://172.18.8.75:28187/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.085 | 0.007 | search_minus_done; http://172.18.8.75:28187/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=45
0.087 | 0.002 | cgi_end;

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