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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2021-10-26 02:27:43, GGGenome : Amazon molly genome, Poecilia_formosa-5.1.2 (Oct, 2013)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

KI519901.1 dna:scaffold scaffold:PoeFor_5.1.2:KI519901.1:1:796020:1 REF
position: 467975-467989
ATATAGCATAACATAAAACCAAGATTTTAT467975TTCATTGACAACATTTCCTGGATGTTTTCTTTTTTTTTTAAATCA
KI519617.1 dna:scaffold scaffold:PoeFor_5.1.2:KI519617.1:1:5572511:1 REF
position: 4799141-4799155
TACCAACCTGAGCTTCTTAACTGTGATGTA4799141AATGTTGTCAATGAACAGGACATATTAGCTGTGGTTGTCAGAAAA
KI519705.1 dna:scaffold scaffold:PoeFor_5.1.2:KI519705.1:1:2098595:1 REF
position: 1126569-1126583
TATTAGATCCTGCAGCTACTCAGCAAACAT1126569AATGTTGTCAATGAATGTAGAAATCTGCATGGCAGTGCAGTTGGT
KI519984.1 dna:scaffold scaffold:PoeFor_5.1.2:KI519984.1:1:605445:1 REF
position: 181323-181337
TTCCTTCTTGCATCCGAAATCCGGCCTCAA181323AATGTTGTCAATGAAGAAGTTTGTTGTTCTGTTGGTCTGTGGGCC
KI519987.1 dna:scaffold scaffold:PoeFor_5.1.2:KI519987.1:1:532583:1 REF
position: 143237-143251
AAATAAAGCGATTCTGGGAAGCCTCTCGTC143237AATGTTGTCAATGAACACATTGAAGACCTGCAGGTTTGGGTTACA
KI520061.1 dna:scaffold scaffold:PoeFor_5.1.2:KI520061.1:1:417825:1 REF
position: 113216-113230
TTTTAGTTACAGATGAGTCGTCTATTTGAT113216AATGTTGTCAATGAAGGCTAGCGGTAATCGCTGTTGATAGGAACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : http://gggenome.dbcls.jp/ja/PoeFor_5.1.2/TTCATTGACAACATT
lang : ja | db : PoeFor_5.1.2 | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.079 | 0.071 | search_plus_done; http://172.18.8.76:28118/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.084 | 0.005 | search_minus_done; http://172.18.8.76:28118/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=49
0.086 | 0.003 | cgi_end;

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