GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2024-11-25 10:18:37, GGGenome : Spirodela polyrhiza genome, v2

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

pseudo8:847305-847319
TCCTAATGTAAGAATATCTGCCCTTCCTTC847305TTCATTGACAACATTCTGATGGATATTTTATAAGCCATATAAAAC
pseudo10:2751539-2751553
CACCTTCTAGAGGAAGAAGCACCTGAAGTC2751539AATGTTGTCAATGAAGAAGGAACGATCATCTTGAACCTAGCTTAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/Spolyrhiza_v1/TTCATTGACAACATT
lang : en | db : Spolyrhiza_v1 | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.081 | 0.072 | search_plus_done; http://172.18.8.74:28310/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.084 | 0.003 | search_minus_done; http://172.18.8.74:28310/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=49
0.085 | 0.001 | cgi_end;

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