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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2021-04-23 18:07:09, GGGenome : American alligator genome, allMis0.2/allMis1 (Aug, 2012)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

JH733458:126729-126743
CTTCCTGTATCTGAGTAAATCAAGAGCAAC126729TTCATTGACAACATTGTAAAGATGTACAGCTCAGAACCAGATTCT
JH733470:598778-598792
AGCTGTTTTGGCTTTGAGCACCTCTTCAGT598778TTCATTGACAACATTTTATGGTGGGAGCCATCCTGGTGAATGTCA
JH737147:639391-639405
TGTTCAGTTCTCAGTTTTGATAACTGATTA639391TTCATTGACAACATTATTTCTGGTCTTTAAGCCAGTTGTTTATCC
JH737379:610257-610271
CAAGATTTTAGTCTGAAGATTTTTCAAAGA610257TTCATTGACAACATTTTAACAGTGAGTTCAGTGGGTACTTCAGGT
JH731505:618169-618183
GATCAGTGGAAGCGAGCTATGGATTATCTC618169AATGTTGTCAATGAACTTAATTACATGACTCAGATTGTTATCATG
JH733899:53761-53775
ACCACAGCAGCCAATTTCCTGCCTCTATGA53761AATGTTGTCAATGAAATGTTGCTCAAGAGATCCCGAGTAGAGGGC
JH735506:239053-239067
TATTCAATTACCTTTATCAATTGAATGCGT239053AATGTTGTCAATGAATGAAATCATGTTTGTTTCAAAAGACTTATT
JH736379:773339-773353
ATCACATCTGTGAAGCTTGAGCATAGTCTT773339AATGTTGTCAATGAAAACTAGCATTTTTACATTCTAGGATTAGCA
JH737404:202015-202029
ACTGGCATCAGCGCGTATGCCCCAACTCTT202015AATGTTGTCAATGAAACCAAGGAGGAATTCTATGCCAACCTTGAC
JH737458:262679-262693
ATTTTAACACCTTCTTACTTCATATCCAAT262679AATGTTGTCAATGAAAAAGCAATGATTTGTCTATTGTTGGAGGCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : http://gggenome.dbcls.jp/ja/allMis1/TTCATTGACAACATT
lang : ja | db : allMis1 | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug :

0.007 | 0.007 | search_start;
0.080 | 0.073 | search_plus_done; http://172.18.8.76:28069/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.085 | 0.005 | search_minus_done; http://172.18.8.76:28069/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=46
0.086 | 0.001 | cgi_end;

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