GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:23:17, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Glycine max cultivar Williams 82 chromosome 16.
CP126441.1:7616604-7616623
GTAAGAACTTACTTTCTGGCTCATCAAAAT7616604CAATGCTGATTTTGGCTTCCTTTGTGCAGCAAGCTAGTCTTTTTCTCATC
Glycine max cultivar Williams 82 chromosome 16.
CP126441.1:23937591-23937610
GTAAGAACTTACTCTCTGGCTCATCAAAAT23937591CAATGCTGATTTTGGCTTCCTTTGTGCAGCAAGCCAGTCTCTTTCTCATC
Asterias rubens genome assembly, chromosome: 1.
LR699092.1:21616957-21616976
TCTTGGGATAATCGCACACAGAAACCACAA21616957CAATGCTGATTTTGGCTTCCTGATGACAAATTCCAAACTCGGCAAGAATA
Cyberlindnera sargentensis strain SHA 17.2 chromosome IV.
CP083467.1:1283705-1283724
CTGGGTAATGAAATGAGATGGAGCCATTTG1283705GGAAGCCAAAATCAGCATTGGATTCATGTCATACTGGTCTTTGTACTTCT
Caenorhabditis uteleia genome assembly, chromosome: X.
OY752138.1:11691693-11691712
AGCATCCGGATTATAAGTATCGTCCACGCC11691693GGAAGCCAAAATCAGCATTGAAAGGTCAAAACCGACTTTCAATTGGCTTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/%20CAATGCTGATTTTGGCTTCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : %20CAATGCTGATTTTGGCTTCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.120 | 0.112 | search_plus_done; http://172.18.8.135:50400/match?q=CAATGCTGATTTTGGCTTCC&k=0&no_gap=0&offset=0&limit=50
0.156 | 0.035 | search_minus_done; http://172.18.8.135:50400/match?q=GGAAGCCAAAATCAGCATTG&k=0&no_gap=0&offset=0&limit=47
0.157 | 0.001 | cgi_end;

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