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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 07:40:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Astatotilapia calliptera genome assembly, chromosome: 2.
LS420020.2:37045166-37045185
CTAGAATCCAAGGTGTGTGACATCTCAGGG37045166AAAAAGGCACCGAAATGTGCGCTGCTTTTCGGTCTGGTTACTACCGTTTA
Astatotilapia calliptera genome assembly, chromosome: 12.
LS420030.2:25878238-25878257
AGAATTCAAAGTGTATGACATCTCGGGGGA25878238AAAAAGGCACCGAAATGTGCGCTGCTTTTTGGTCTGGTTACTACCGTTTA
Astatotilapia calliptera genome assembly, chromosome: 16.
LS420034.2:12743596-12743615
AGAATCCAAAGTGTATGACATCTCAAATTA12743596AAAAAGGCACCGAAATGTGCGTTGCTTTTTGGTCTGGTTACTACCGTTTA
Neolamprologus multifasciatus genome assembly, chromosome: 3.
OY755017.1:5611957-5611976
CTAGAATCCAAAGTGTATCACATCTCAGGA5611957AAAAAGGCACCGAAATGTGCGCTGCTTTTCGATCTGGTTACCCATCCCTA
BOHIF69TF BOHI Brassica oleracea genomic clone BOHIF69, genomic survey sequence.
BH505226.1:277-296
ATACTAATTGTTTTGACCTTTAGTACTAAC277AAAAAGGCACCGAAATGTGCTAACTGATGTTTAATTTTGTATTAAAATAG
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB077I08, *** SEQUENCING IN PROGRESS ***, 7 ordered pieces.
AC241067.1:69320-69339
ATACTAATTGTTTTGACCTTTAGTACTAAT69320AAAAAGGCACCGAAATGTGCTAACTGTTGTTTAATTTTGTATTAAAATAG
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:27039831-27039850
ATACTAATTGTTTTGACCTTTAGTACTAAT27039831AAAAAGGCACCGAAATGTGCTAACTGTTGTTTAATTTTGTATTAAAATAG
Brassica napus genome assembly, chromosome: A03.
HG994357.1:27058760-27058779
ATACTAATTGTTTTGACCTTTAGTACTAAT27058760AAAAAGGCACCGAAATGTGCTAACCGTTGTTTAATTTTGTATTAAAATAG
Brassica napus genome assembly, chromosome: C07.
HG994371.1:50851673-50851692
ATACTAATTGTTTTGACCTTTAGTACTAAT50851673AAAAAGGCACCGAAATGTGCTAACTGTTGTTTAATTTTGTATTAAAATAG
Brassica rapa genome, scaffold: A03.
LR031572.1:26936152-26936171
ATACTAATTGTTTTGACCTTTAGTACTAAT26936152AAAAAGGCACCGAAATGTGCTAACCGTTGTTTAATTTTGTATTAAAATAG
Brassica rapa genome assembly, chromosome: A03.
LS974619.2:27063382-27063401
ATACTAATTGTTTTGACCTTTAGTACTAAT27063382AAAAAGGCACCGAAATGTGCTAACCGTTGTTTAATTTTGTATTAAAATAG
Blera fallax genome assembly, chromosome: 5.
OX337248.1:70517451-70517470
AACTTTTGAATTAGCTAATAGACCACCGCC70517451AAAAAGGCACCGAAATGTGCGAAGTGAGGACAATATCAGAGCTGCAGCGG
Anaspis maculata genome assembly, chromosome: X.
OX421968.1:52888522-52888541
TCAATTTTTTTCGACCCCAGATTTTTTTCG52888522AAAAAGGCACCGAAATGTGCTTTTTCAAAATTTTATATGCGGTTTCTTTC
Astatotilapia calliptera genome assembly, chromosome: 2.
LS420020.2:18977844-18977863
TAAACGGTAGTAACCAGACTGAAAAGCAGC18977844GCACATTTCGGTGCCTTTTTTTCCTGAGATGTCATACACTTTGGATTCTA
Neolamprologus multifasciatus genome assembly, chromosome: 7.
OY755016.1:2898025-2898044
TAAACGGTAGTAACCAGACCGAACAGCAGC2898025GCACATTTCGGTGCCTTTTTTTTCCTGAGCTGTGATACACTTTGGATTCT
Brassica napus cultivar Xiang5A chromosome 19.
CP123894.1:4816330-4816349
CTATTTTAATACAAAATTAAACAACAGTTA4816330GCACATTTCGGTGCCTTTTTATTAGTACTAAAGGTCAAAACAATTAGTAT
Brassica rapa beta-carotene hydroxylase gene, complete cds.
DQ156907.1:2570-2589
CTATTTTAATACAAAATTAAACAACAGTTA2570GCACATTTCGGTGCCTTTTTATTAGTACTAAAGGTCAAAACAATTAGTAT
Brassica napus beta-carotene hydroxylase (BCH) gene, complete cds.
HM212505.1:1069-1088
CTATTTTAATACAAAATTAAACAACAGTTA1069GCACATTTCGGTGCCTTTTTATTAGTACTAAAGGTCAAAACAATTAGTAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAAAAGGCACCGAAATGTGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAAAGGCACCGAAATGTGC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.355 | 0.347 | search_plus_done; http://172.18.8.135:50400/match?q=AAAAAGGCACCGAAATGTGC&k=0&no_gap=0&offset=0&limit=50
0.469 | 0.113 | search_minus_done; http://172.18.8.135:50400/match?q=GCACATTTCGGTGCCTTTTT&k=0&no_gap=0&offset=0&limit=37
0.472 | 0.003 | cgi_end;

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