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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-08 04:42:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

BR003137 light-chilled whole plant cDNA library KBCD Brassica rapa subsp. pekinensis cDNA clone KBCD-016H04 5', mRNA sequence.
EX018493.1:104-123
TTCTCCTGTGCGTGCGTGCGTGTCTACGCT104AACCCGTAGCTCTTTCGATTATCTTTGATCGTGCGATTGATCTTCTACTG
Brassica rapa subsp. pekinensis, pooled multiple clones, WORKING DRAFT SEQUENCE, 71 unordered pieces.
FJ789647.1:59452-59471
GTTCTCCTGTGCGTGCGTGCGTGTCTACGT59452AACCCGTAGCTCTTTCGATTATCTTTGATCGTGCGATTGATCTTCTACTG
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB010L05, complete sequence.
AC189221.2:48526-48545
GTTCTCCTGTGCGTGCGTGCGTGTCTACGT48526AACCCGTAGCTCTTTCGATTATCTTTGATCGTGCGATTGATCTTCTACTG
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_15492.
FX692944.1:2754-2773
CAGTAGAAGATCAATCGCACGATCAAAGAT2754AATCGAAAGAGCTACGGGTTACGTAGACACGCACGCACGCACAGGAGAAC
Brassica rapa subsp. pekinensis, pooled multiple clones, WORKING DRAFT SEQUENCE, 882 unordered pieces.
FJ789639.1:2705271-2705290
CAGTAGAAGATCAATCGCACGATCAAAGAT2705271AATCGAAAGAGCTACGGGTTACGTAGACACGCACGCACGCACAGGAGAAC
Brassica rapa subsp. pekinensis, pooled multiple clones, WORKING DRAFT SEQUENCE, 92 unordered pieces.
FJ789644.1:913570-913589
CAGTAGAAGATCAATCGCACGATCAAAGAT913570AATCGAAAGAGCTACGGGTTACGTAGACACGCACGCACGCACAGGAGAAC
Brassica napus genome assembly, chromosome: A09.
HG994363.1:44813547-44813566
CAGTAGAAGATCAATCGCACGATCAAAGAT44813547AATCGAAAGAGCTACGGGTTACGTAGACACGCACGCACGCACAGGAGAAC
Trigastrotheca stricta voucher 14CS8874 (KUN) plastid, complete genome.
MK397905.1:36613-36632
GTGGGCTAATCCAACTAATCTTGCTTGTAC36613AATCGAAAGAGCTACGGGTTTATCTCTCCATCGAATCAAATTGGCTAAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AACCCGTAGCTCTTTCGATT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AACCCGTAGCTCTTTCGATT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.175 | 0.166 | search_plus_done; http://172.18.8.135:50400/match?q=AACCCGTAGCTCTTTCGATT&k=0&no_gap=0&offset=0&limit=50
0.201 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=AATCGAAAGAGCTACGGGTT&k=0&no_gap=0&offset=0&limit=47
0.204 | 0.003 | cgi_end;

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