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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 21:45:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Orcinus orca genome assembly, chromosome: X.
OW443365.1:121323407-121323426
AAATTGAATAACTTAGTGGTTTATTGAAAC121323407AACCTACCCTACTACCACAGACACACACACACACACGCATGCACACAGAG
Brassica napus cultivar Xiang5A chromosome 2.
CP123877.1:6221562-6221581
CTTTTTACAGCTATTTCTTGCCCGTCAAGT6221562AACCTACCCTACTACCACAGTTTCGAATAAACGACAAAGTATTTTGCATT
Brassica napus genome assembly, chromosome: A01.
HG994355.1:6447434-6447453
CTTTTTACAGCTATTTCTTGCCCGTCAAGT6447434AACCTACCCTACTACCACAGTTTCGAATAAACGACAAAGTATTTTGCATT
Brassica napus genome assembly, chromosome: C01.
HG994365.1:9442516-9442535
CTTTTTACAGCTATTTCTTGCCCGTCAAGT9442516AACCTACCCTACTACCACAGTTTCGAATAAACGACAAAGTATTTTGCATT
Brassica rapa genome, scaffold: A01.
LR031571.1:6269173-6269192
CTTTTTACAGCTATTTCTTGCCCGTCAAGT6269173AACCTACCCTACTACCACAGTTTCGAATAAACGACAAAGTATTTTGCATT
Brassica oleracea HDEM genome, scaffold: C1.
LR031878.1:9286728-9286747
CTTTTTACAGCTATTTCTTGCCCGTCAAGT9286728AACCTACCCTACTACCACAGTTTCGAATAAACGACAAAGTATTTTGCATT
Brassica rapa genome assembly, chromosome: A01.
LS974617.2:6293525-6293544
CTTTTTACAGCTATTTCTTGCCCGTCAAGT6293525AACCTACCCTACTACCACAGTTTCGAATAAACGACAAAGTATTTTGCATT
Nudaria mundana genome assembly, chromosome: 15.
OY748301.1:4755944-4755963
CGATGGAGCACCTTTTTAAAAAAGAAAAAG4755944AACCTACCCTACTACCACAGAATAGGGTATTAGTACTTCATAATGCTTTT
Brassica rapa subsp. pekinensis clone KBrB123I09, complete sequence.
FP090262.1:8684-8703
AATGCAAAATACTTTGTCGTTTATTCGAAA8684CTGTGGTAGTAGGGTAGGTTACTTGACGGGCAAGAAATAGCTGTAAAAAG
Brassica rapa BcRK5 gene for receptor kinase 5, complete cds.
AB041621.1:3342-3361
AATGCAAAATACTTTGTCGTTTATTCGAAA3342CTGTGGTAGTAGGGTAGGTTACTTGACGGGCAAGAAATAGCTGTAAAAAG
Brassica napus cultivar Xiang5A chromosome 13.
CP123888.1:47096802-47096821
AATGCAAAATACTTTGTCGTTTATTCGAAA47096802CTGTGGTAGTAGGGTAGGTTACTTGACGGGCAAGAAATAGCTGTAAAAAG
B.oleraceae gene encoding serine/threonine kinase, ARLK.
Y12530.1:2508-2527
AATGCAAAATACTTTGTCGTTTATTCGAAA2508CTGTGGTAGTAGGGTAGGTTACTTGACGGGCAAGAAATAGCTGTAAAAAG
Brassica oleracea SFR2 gene, partial.
Y18257.1:1388-1407
AATGCAAAATACTTTGTCGTTTATTCGAAA1388CTGTGGTAGTAGGGTAGGTTACTTGACGGGCAAGAAATAGCTGTAAAAAG
Helicoverpa armigera genome assembly, chromosome: 15.
OZ005781.1:7214300-7214319
TTATGGCATCTCCGCTCATCTTCCCTTACT7214300CTGTGGTAGTAGGGTAGGTTATTACACAAAACATACCATAATACTAGTAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AACCTACCCTACTACCACAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AACCTACCCTACTACCACAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.123 | 0.114 | search_plus_done; http://172.18.8.135:50400/match?q=AACCTACCCTACTACCACAG&k=0&no_gap=0&offset=0&limit=50
0.148 | 0.025 | search_minus_done; http://172.18.8.135:50400/match?q=CTGTGGTAGTAGGGTAGGTT&k=0&no_gap=0&offset=0&limit=42
0.152 | 0.004 | cgi_end;

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