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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-17 01:20:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pipistrellus nathusii genome assembly, chromosome: 2.
OY882859.1:196298490-196298507
AGGTTGAGTTGCTATGTGCAGGAGCAAGGC196298490AACGTTGCGGCAAGCCATACATTGCACCCACGTGCCTTTCTGCACTAA
KR 1020220135918-A/43: SNP markers and primer sets for high-throughput identification of cabbage cultivar and uses thereof.
PE014915.1:1405-1422
TCAGTTTGGTAATGTAAACTTATCATGCAG1405AACGTTGCGGCAAGCCATGGGAAGGTGGGTAAACCGAGGAATTAAGCT
KR 1020220135918-A/177: SNP markers and primer sets for high-throughput identification of cabbage cultivar and uses thereof.
PE015049.1:1384-1401
TCAGTTTGGTAATGTAAACTTATCATGCAG1384AACGTTGCGGCAAGCCATGGGAAGGTGGGTAAACCGAGGAATTAAGCT
uncultured Microbacter sp. isolate f47c1d3f-cc9c-499c-b3b6-d234891401ce genome assembly, chromosome: 9.
OY762996.1:387395-387412
TCTTTCGTCAGTTTGCAGGTGATGCGGGTC387395AACGTTGCGGCAAGCCATTTGCTGGTGATGGCGACCATTGCCATTACT
Brassica oleracea var. viridis mRNA, clone: KALE-021K15, 5' end sequence.
DK463830.1:487-504
CAAAACCGCTGCTCTTGAATTCACAACAAG487AACGTTGCGGCAAGCCATGGGAAGGTGGGTAAACCGAGGAATTAAGCT
BNAESTBH Mustard flower buds Brassica rapa cDNA clone F0648, mRNA sequence.
L35832.1:18-35
CTTGAATTCACAACAAG18AACGTTGCGGCAAGCCATGGGAAGGTGGGTAAACGGAGGAATTAAGCT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' linkage group A10 clone KBrB119O22, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces.
AC234732.1:18300-18317
TCGGTTTGGTAATGTAAACTTATCATGCAG18300AACGTTGCGGCAAGCCATGGGAAGGTGGGTAAACCGAGGAATTAAGCT
Ustilago hordei strain Uh805 chromosome 18.
CP094219.1:88444-88461
ATGGCATCTGTCCTTCCCCAAATGAGGGAG88444AACGTTGCGGCAAGCCATGCGGCTGTCCCATCATCATGGCTTCACCCT
Brassica napus cultivar Xiang5A chromosome 4.
CP123879.1:69418200-69418217
TCGGTTTGGTAATGTAAACTTATCATGCAG69418200AACGTTGCGGCAAGCCATGGGAAGGTGGGTAAACCGAGGAATTAAGCT
Warburgia ugandensis isolate CL-2023a chromosome 6.
CP141131.1:73163467-73163484
ACACACGCCCCCGTGTGTCACCACACGACC73163467AACGTTGCGGCAAGCCATCCACCCTCGGGGTCGGGGTTTGGCTCCGAT
Brassica napus genome assembly, chromosome: A09.
HG994363.1:53280570-53280587
TCAGTTTGGTAATGTAAACTTATCATGCAG53280570AACGTTGCGGCAAGCCATGGGAAGGTGGGTAAACCGAGGAATTAAGCT
Brassica napus genome assembly, chromosome: C08.
HG994372.1:41452402-41452419
TCAGTTTGGTAATGTAAACTTATCATGCAG41452402AACGTTGCGGCAAGCCATGGGAAGGTGGGTAAACCGAGGAATTAAGCT
Brassica rapa genome, scaffold: A09.
LR031568.1:57537357-57537374
TGTAATAATACTCAGTTTGGTATCATGCAG57537357AACGTTGCGGCAAGCCATGGGAAGGTGGGTAAACCGAGGAATTAAGCT
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:50693988-50694005
TCAGTTTGGTAATGTAAACTTATCATGCAG50693988AACGTTGCGGCAAGCCATGGGAAGGTGGGTAAACCGAGGAATTAAGCT
Brassica rapa genome assembly, chromosome: A09.
LS974625.2:68060843-68060860
TGTAATAATACTCAGTTTGGTATCATGCAG68060843AACGTTGCGGCAAGCCATGGGAAGGTGGGTAAACCGAGGAATTAAGCT
Avena sativa genome assembly, chromosome: 5C.
OU342389.1:459280127-459280144
CCTGGAAGGACAGTACACGCAAGAGACAAC459280127AACGTTGCGGCAAGCCATTGTGCTCAAGTCATTCTGGCCAGGAGATCT
Avena sativa genome assembly, chromosome: 12.
OV702290.1:491804456-491804473
CCTGGAAGGACAGTACACGCAAGAGACAAC491804456AACGTTGCGGCAAGCCATTGTGCTCAAGTCATTCTGGCCAGGAGATCT
Salmonella enterica strain FDAARGOS_718 chromosome.
CP054901.1:3377574-3377591
GGCGCGGCCTGCGTCTGGCTACTGAACAAC3377574AACGTTGCGGCAAGCCATCCCAACAGGTGTTTTTTGAATCTCATTTAA
Hymenobacter cellulosilyticus strain 5116 S-3 chromosome, complete genome.
CP095046.1:3866832-3866849
ACGACAACCGCTCACCCCGGCCGAGTTGGA3866832AACGTTGCGGCAAGCCATTCCGGACAACCGTTACGAGCAGCACCGCTG
Stieleria sp. HD01 chromosome, complete genome.
CP141221.1:4389999-4390016
ATGCCAACAGGCAGCGGCCGCCGGGAGCCA4389999AACGTTGCGGCAAGCCATCGAGGATCGAATCCATCAGTGCGAAGCTCG
Yponomeuta sedellus genome assembly, chromosome: 4.
OW203725.1:10842628-10842645
GAAACTTTTGGCGACATTTGTGGCCTTGAA10842628AACGTTGCGGCAAGCCATAACGAGGTCACAATTCCGGGCGTGCAGGCA
Ophion slaviceki genome assembly, chromosome: 11.
OX101793.1:9461125-9461142
CGACTGAAACAGAGCCTGGTATCATTGTCG9461125AACGTTGCGGCAAGCCATATAAATGCAGTCTCGTACCTTTAGTCACAC
Ophion ellenae genome assembly, chromosome: 11.
OY723395.1:14322004-14322021
CGACTGAAACAGAGCCTGGTATCATTGTCG14322004AACGTTGCGGCAAGCCATATAAATGCAGTCTCGTACCTTCAGTCGCAC
uncultured Microbacter sp. isolate 18e5b0ea-38ec-4f9a-a4be-e39ef802a315 genome assembly, chromosome: 1.
OY782761.1:1180386-1180403
AGTAATGGCAATGGTCGCCATCACCAGCAA1180386ATGGCTTGCCGCAACGTTGACCCGCATCACCTGCAAACTGACGAAAGA
BoTo122G24/FE BOTO1 Brassica oleracea genomic, genomic survey sequence.
ET052005.1:304-321
AGCTTAATTCCTCGGTTTACCCACCTTCCC304ATGGCTTGCCGCAACGTTCTGCATGATAAGTTTACATTACCAAACTGA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB046G18, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC189365.2:9747-9764
AGCTTAATTCCTCGGTTTACCCACCTTCCC9747ATGGCTTGCCGCAACGTTCTGCATGATAAGTTTACATTACCAAACCGA
Raphanus sativus cultivar WK10039 clone RsH014F17, *** SEQUENCING IN PROGRESS ***, 12 unordered pieces.
AC255135.1:91333-91350
AGCTTAATTCCTCGGTTTACCCACCTACCC91333ATGGCTTGCCGCAACGTTCTGCATGATAAATTTACATTACCAAACTGA
Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:220871-220888
AGCTTAATTCCTCGGTTTACCCACCTTCCC220871ATGGCTTGCCGCAACGTTCTGCATGATAAGTTTACATTACCAAACTGA
Lepidium didymum genome assembly, chromosome: 2.
OY986992.1:224831-224848
AGCTTAATTCCTCGGTTTACCCACCTTGCC224831ATGGCTTGCCGCAACGTTCTACATCATAAAATATACAATACCAAACCA
Agrobacterium radiobacter K84 chromosome 2, complete sequence.
CP000629.1:228084-228101
GCCGCAAATGTTGGCTGCTCCCGCCGTCGC228084ATGGCTTGCCGCAACGTTCGGCGTCCGTCGCGTTATGGTGCCGCCGGC
Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 chromosome, complete sequence.
CP019174.1:2436197-2436214
TTAAATGAGATTCAAAAAACACCTGTTGGG2436197ATGGCTTGCCGCAACGTTGTTGTTCAGTAGCCAGACGCAGGCCGCGCC
Rhizobium rhizogenes strain CA75/95 chromosome 2, complete sequence.
CP049214.1:498173-498190
GCCGCAAATGTTGGTTGCTCCCGCCGTCGC498173ATGGCTTGCCGCAACGTTCGGCGTCCGTCGCGTTATGGTGCCGCCGGC
Salmonella enterica strain CFSAN072779 isolate 8 chromosome, complete genome.
CP073107.1:773426-773443
TTAAATGAGATTCAAAAAACACCTGTTGGG773426ATGGCTTGCCGCAACGTTGTTGTTCAGTAGCCAGACGCAGGCCGCGCC
Salmonella enterica strain CFSAN024230 chromosome, complete genome.
CP075011.1:2436195-2436212
TTAAATGAGATTCAAAAAACACCTGTTGGG2436195ATGGCTTGCCGCAACGTTGTTGTTCAGTAGCCAGACGCAGGCCGCGCC
Salmonella enterica strain CFSAN024144 chromosome, complete genome.
CP075017.1:1995686-1995703
TTAAATGAGATTCAAAAAACACCTGTTGGG1995686ATGGCTTGCCGCAACGTTGTTGTTCAGTAGCCAGACGCAGGCCGCGCC
Salmonella enterica strain CFSAN060804 chromosome, complete genome.
CP075110.1:2405570-2405587
TTAAATGAGATTCAAAAAACACCTGTTGGG2405570ATGGCTTGCCGCAACGTTGTTGTTCAGTAGCCAGACGCAGGCCGCGCC
Salmonella enterica subsp. enterica strain CFSAN058598 chromosome, complete genome.
CP077696.1:2443457-2443474
TTAAATGAGATTCAAAAAACACCTGTTGGG2443457ATGGCTTGCCGCAACGTTGTTGTTCAGTAGCCAGACGCAGGCCGCGCC
Salmonella enterica subsp. enterica serovar Bredeney strain FSIS1702037 chromosome, complete genome.
CP082381.2:2418889-2418906
TTAAATGAGATTCAAAAAACACCTGTTGGG2418889ATGGCTTGCCGCAACGTTGTTGTTCAGTAGCCAGACGCAGGCCGCGCC
Salmonella enterica subsp. enterica serovar Give strain RM019 chromosome, complete genome.
CP117392.1:2374887-2374904
TTAAATGAGATTCAAAAAACACCTGTTGGG2374887ATGGCTTGCCGCAACGTTGTTGTTCAGTAGCCAGACGCAGGCCGCGCC
Salmonella enterica subsp. enterica serovar Give strain RM007 chromosome, complete genome.
CP117402.1:2374887-2374904
TTAAATGAGATTCAAAAAACACCTGTTGGG2374887ATGGCTTGCCGCAACGTTGTTGTTCAGTAGCCAGACGCAGGCCGCGCC
Salmonella enterica subsp. enterica strain NCTC6480 genome assembly, chromosome: 1.
LS483454.1:2554759-2554776
TTAAATGAGATTCAAAAAACACCTGTTGGG2554759ATGGCTTGCCGCAACGTTGTTGTTCAGTAGCCAGACGCAGGCCGCGCC
Aelia acuminata genome assembly, chromosome: 4.
OU426982.1:15720119-15720136
CCGCCAGTCTGCCCCTGCACCATGGTGGCG15720119ATGGCTTGCCGCAACGTTTGGTTTGGGCTACCCCTTCCAGGCTGTCTG
Micropterix aruncella genome assembly, chromosome: 13.
OX155962.1:7841157-7841174
TTTTAATATCCAACAGGTGGAACGGTCATC7841157ATGGCTTGCCGCAACGTTGCAAAGGCAGAAGAGGCGAAGGACGACATT
Micropterix aruncella genome assembly, chromosome: 13.
OX155962.1:7852864-7852881
TTTTAATATCCAACAGGTGGAACGGTCATC7852864ATGGCTTGCCGCAACGTTGCAAAGGCAGAAGAGGCGAAGGACGATATT
Ophion ventricosus genome assembly, chromosome: 13.
OZ010723.1:4780595-4780612
GTGCGACTAAACGTGAGAGGCTGCATTACT4780595ATGGCTTGCCGCAACGTTCGACAATGATACCAGGCTCTGTTTCAGTCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AACGTTGCGGCAAGCCAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AACGTTGCGGCAAGCCAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.382 | 0.373 | search_plus_done; http://172.18.8.135:50400/match?q=AACGTTGCGGCAAGCCAT&k=0&no_gap=0&offset=0&limit=50
0.476 | 0.094 | search_minus_done; http://172.18.8.135:50400/match?q=ATGGCTTGCCGCAACGTT&k=0&no_gap=0&offset=0&limit=27
0.490 | 0.015 | cgi_end;

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