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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 07:39:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sciurus carolinensis genome assembly, chromosome: 3.
LR738592.1:76119813-76119832
TTAGATTTGAAGATAAACTACTGCATTTTA76119813AACTCTGCCTTCTCTGCACATCTGTTCTTGTTGTCAAATAACAATTATAT
Sciurus vulgaris genome assembly, chromosome: 3.
LR738613.1:78621794-78621813
TTAGATTTGAAGATAAACTACTGCATTTTA78621794AACTCTGCCTTCTCTGCACATCTGTTCTTGTTGTCAAATAACAATTATAT
Phalacrocorax aristotelis genome assembly, chromosome: Z.
OX451226.1:16163989-16164008
GTAAAGACTGAAGCAAAGAAGGCACTCTGT16163989AACTCTGCCTTCTCTGCACACCGTGTCACCAGGGCACCCACCTCATTCAG
Synechococcus phage ACG-2014f isolate Syn7803C16, complete genome.
KJ019146.1:103621-103640
ACAGGCGACGAGACCTTCTACAACGAAGTC103621AACTCTGCCTTCTCTGCACAGAACCAGTCCGGTACAGCTACTCAGGGTAA
Synechococcus phage ACG-2014f isolate Syn7803C24, complete genome.
KJ019151.1:102486-102505
ACAGGCGACGAGACCTTCTACAACGAAGTC102486AACTCTGCCTTCTCTGCACAGAACCAGTCCGGTACAGCTACTCAGGGTAA
TSA: Pyrus x bretschneideri Unigene8425_XinShao mRNA sequence.
JR603553.1:934-953
GGGGTAAAGAAGTACCATTCGTTTTCTCCA934AACTCTGCCTTCTCTGCACATCATAAACAATCCCAATTTGTAACCAATAC
TSA: Pyrus x bretschneideri Unigene17429_XinShao mRNA sequence.
JR612226.1:1034-1053
GGGGTAAAGAAGTACCATTCGTTTTCTCCA1034AACTCTGCCTTCTCTGCACATCATAAACAATCCCAATTTGTAACCAATAC
Apteryx australis mantelli genome assembly, scaffold: scaffold77.
LK064676.1:1289102-1289121
CTGAAAGGCTTTTTCTTCCTCGATCGAGCT1289102TGTGCAGAGAAGGCAGAGTTCACAGAGGGAGGGTGAGGTGAGAGAGATGT
Apteryx australis mantelli genome assembly, scaffold: scaffold773.
LK067121.1:3844534-3844553
CATCCTGAGCCCTGGTGAAGCATTACCCCC3844534TGTGCAGAGAAGGCAGAGTTACTGAATGCCTTCTTTGTTTCAGTCTTTAC
Microcaecilia unicolor genome assembly, chromosome: 14.
LR594645.1:33192040-33192059
TGGATGTCTCCAGAGGCTGCTGGGGAGAGT33192040TGTGCAGAGAAGGCAGAGTTAGCATATTATGGGACTGATCTGACTAACCT
Phalacrocorax aristotelis genome assembly, chromosome: Z.
OX451226.1:16191304-16191323
CTGAATGAGGTGGGTGCCCTGGTGACACAG16191304TGTGCAGAGAAGGCAGAGTTACAGAGTGCCTTCTTTGCTTTGGTCTATAC
Phalacrocorax carbo genome assembly, chromosome: Z.
OY997604.1:66301347-66301366
CTGGATGAGGTGGGTGCCCTGGTGACACAG66301347TGTGCAGAGAAGGCAGAGTTGCAGAGTGCCTTCTTTGCTTCAGTCTATAC
Lotus japonicus genomic DNA, chromosome 4, clone: LjT06K07, TM1749.
AP010314.1:87119-87138
CTGTTACATTCAATGTTATTCTTGGAGGCC87119TGTGCAGAGAAGGCAGAGTTGAGGAGGCTCTGGGTATGCTTGAGACACTT
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:83186722-83186741
CTGTTACATTCAATGTTATTCTTGGAGGCC83186722TGTGCAGAGAAGGCAGAGTTGAGGAGGCTCTGGGTATGCTTGAGACACTT
Crataegus laevigata genome assembly, chromosome: 11.
OY756948.1:4814767-4814786
GTATTGGTTACATATTGGGATTGTTTATGT4814767TGTGCAGAGAAGGCAGAGTTTGGAGAAAAGGAATGGTACTTCTTTACACC
Pyrus communis genome assembly, chromosome: 4.
OY757071.1:3962939-3962958
GTATTGGTTGCAAATTGGGATTGTTTATGA3962939TGTGCAGAGAAGGCAGAGTTTGGAGAAAATGAATGGTACTTCTTTACCCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AACTCTGCCTTCTCTGCACA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AACTCTGCCTTCTCTGCACA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.123 | 0.114 | search_plus_done; http://172.18.8.135:50400/match?q=AACTCTGCCTTCTCTGCACA&k=0&no_gap=0&offset=0&limit=50
0.171 | 0.048 | search_minus_done; http://172.18.8.135:50400/match?q=TGTGCAGAGAAGGCAGAGTT&k=0&no_gap=0&offset=0&limit=43
0.177 | 0.006 | cgi_end;

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