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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-14 21:52:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

TSA: Raphanus sativus var. sativus RNA, contig: WG3_15422.
FX667574.1:604-625
ATCCATAATCTGCTTCTTCATATTCATACC604AAGAACCTCACCTTCACCAGCTAAAACACTGAAACCTTTATACACAACAAAA
Raphanus sativus genome assembly, chromosome: 1.
LR778310.1:23792613-23792634
ATCCATAATCTGCTTCTTCATATTCATACC23792613AAGAACCTCACCTTCACCAGCTAAAACACTGAAAGCTTTATACACAACAAAA
Raphanus sativus genome assembly, chromosome: 6.
OY743212.1:23792613-23792634
ATCCATAATCTGCTTCTTCATATTCATACC23792613AAGAACCTCACCTTCACCAGCTAAAACACTGAAAGCTTTATACACAACAAAA
RS2BD87TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EW726394.1:127-148
TTTTGTTGTGTATAAAGGTTTCAGTGTTTT127AGCTGGTGAAGGTGAGGTTCTTGGTATGAATATGAAGAAGCAGATTATGGAT
RS1EV63TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence.
FD562100.1:217-238
TTTTGTTGTGTATAAAGGTTTCAGTGTTTT217AGCTGGTGAAGGTGAGGTTCTTGGTATGAATATGAAGAAGCAGATTATGGAT
RS2FP77TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
FD571373.1:10-31
GAGTGTTTT10AGCTGGTGAAGGTGAGGTTCTTGGTATGAATATGAAGAAGCAGATTATGGAT
TSA: Raphanus sativus RS25617 mRNA sequence.
JT810164.1:142-163
TTTTGTTGTGTATAAAGGTTTCAGTGTTTT142AGCTGGTGAAGGTGAGGTTCTTGGTATGAATATGAAGAAGCAGATTATGGAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAGAACCTCACCTTCACCAGCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAGAACCTCACCTTCACCAGCT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.103 | 0.095 | search_plus_done; http://172.18.8.135:50400/match?q=AAGAACCTCACCTTCACCAGCT&k=0&no_gap=0&offset=0&limit=50
0.349 | 0.245 | search_minus_done; http://172.18.8.135:50400/match?q=AGCTGGTGAAGGTGAGGTTCTT&k=0&no_gap=0&offset=0&limit=47
0.351 | 0.003 | cgi_end;

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