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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-07 05:44:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Trifolium pratense DNA, clone:RC0206r.ab1.
DE244960.1:155-174
ACTTGATTCACCTAGAGAAGAACATGGTCG155AAGCAACCAAAGACGAGGTGGCGCTCGAGAACGTGGACGTGGTCGTGGAT
Trifolium repens isolate ACLI19 chromosome 08_0cc.
CP125850.1:31059890-31059909
AGTCGATTCACCTAGAGAAGAGCATGGTCG31059890AAGCAACCAAAGACGAGGTGGTGATCGAGAACGTGGACGCGGTCGTGGAT
Trifolium subterraneum genome assembly, chromosome: 2.
OX637462.1:874836-874855
AGTCGATTCACCTAGAGAAGAGCATGGTCG874836AAGCAACCAAAGACGAGGTGACGATCGAGGACGTGGACGTGGTCGTGGAT
Trifolium subterraneum genome assembly, chromosome: 2.
OX637462.1:45311779-45311798
AGTCGATTCACCTAGAGAAGAGCATGGTCC45311779AAGCAACCAAAGACGAGGTGACGATCAAGGACGTGGACGTGGTCGTGGAT
Trifolium subterraneum genome assembly, chromosome: 2.
OX637462.1:52659396-52659415
AGTCGATTCACCTATAGAAGAGCATGGTCG52659396AAGCAACCAAAGACGAGGTGACGATCGAGGACGTGGACGTGGTCGTGGAT
Trifolium subterraneum genome assembly, chromosome: 4.
OX637464.1:45567605-45567624
AGTCAATTCACCTATAGAAGAGCATGGTCG45567605AAGCAACCAAAGACGAGGTGACGATCGAGGACGTGGACGTGGTCGTGGAT
Trifolium subterraneum genome assembly, chromosome: 4.
OX637464.1:46412547-46412566
AGTCGATTCACCTAGAGAAGAGCATGGTCG46412547AAGCAACCAAAGACGAGGTGACGATCGAGGACGTGGACGTGGTCGTGGAT
Trifolium subterraneum genome assembly, chromosome: 5.
OX637465.1:23500921-23500940
AATCGATTCACCTAGAGAAGAGCATGGTCG23500921AAGCAACCAAAGACGAGGTGACGATCGAGGACGTAGACGTGGTCGTGGAT
Trifolium subterraneum genome assembly, chromosome: 6.
OX637466.1:52123211-52123230
AGTCGATTCACCTAGAGAAGAGCATGGTCG52123211AAGCAACCAAAGACGAGGTGACGATCGAGGACGTGGACGTGGTCGTGGAT
Trifolium subterraneum genome assembly, chromosome: 7.
OX637467.1:52879691-52879710
AGTCGATTCACCTAGAGAAGAGCATGGTCG52879691AAGCAACCAAAGACGAGGTGACGATCGAGGACGTGGACGTGGTCGTGGAT
Trifolium subterraneum genome assembly, chromosome: 8.
OX637468.1:44259130-44259149
AGTCGATTCACCTAGAGAAGAGCATGATCG44259130AAGCAACCAAAGACGAGGTGACGATCGAGGACGTGGTCGTGGATATGGAG
Trifolium subterraneum genome assembly, chromosome: 8.
OX637468.1:47439125-47439144
AGTTGATTCACCTAGAGAAGAGCATGGTCG47439125AAGCAACCAAAGACGAGGTGACGATCGAGGACGTGGGAGAGGATCTCCAA
Trifolium dubium genome assembly, chromosome: 3.
OX638064.1:95451-95470
AGTTGATTCACCTAGAGAACAACATGGCCG95451AAGCAACCAAAGACGAGGTGGCAATCAAGAACGTGGATGCGGTCGTGGAA
Trifolium dubium genome assembly, chromosome: 4.
OX638065.1:5905856-5905875
AGTGGATTCATCAAGAGAACAACATGGTCG5905856AAGCAACCAAAGACGAGGTGGCAATCGAGAACGTGGACGCAGTCGTGGAT
Trifolium dubium genome assembly, chromosome: 4.
OX638065.1:5961954-5961973
AGTTGATTCACCTAGAGAACAACATGGCCG5961954AAGCAACCAAAGACGAGGTGGCAATCAAGAACGTGGACGCGGTCGTGGAA
Trifolium dubium genome assembly, chromosome: 8.
OX638069.1:28135102-28135121
AGTTGATTCACCTAGAGAACAACATGGCCG28135102AAGCAACCAAAGACGAGGTGGCAATCAAGAACGTGGACGCGGTCGTGGAA
Trifolium dubium genome assembly, chromosome: 10.
OX638071.1:3732832-3732851
AGTTGATTCACCTAAAGAACAACATGACCG3732832AAGCAACCAAAGACGAGGTGGCAATCAAGAACGTGGACGCGGTCGTGGAT
Trifolium dubium genome assembly, chromosome: 10.
OX638071.1:27074057-27074076
AGTTGATTCACCTAGAGAACAACATGGCCG27074057AAGCAACCAAAGACGAGGTGGCAATCAAGAACGTGGACGCGGTCGTGGAA
Trifolium fragiferum genome assembly, chromosome: 1.
OX940789.1:17896093-17896112
AGTTGTTTCACCTAAAGAAGAACATGGTCG17896093AAGCAACCAAAGACGAGGTGGCGATCGAGAACGTGGACGCGATCGTGGAT
Trifolium fragiferum genome assembly, chromosome: 1.
OX940789.1:41912166-41912185
AGTTGTTTCACCTAAAGAAGAGCATGGTCG41912166AAGCAACCAAAGACGAGGTGGCGATCGAGAACGTGGACGCGGTCGTGGAT
Trifolium fragiferum genome assembly, chromosome: 1.
OX940789.1:50350030-50350049
AGTTGTTTCACCTAAAGAAGAGCATGGTCG50350030AAGCAACCAAAGACGAGGTGGCGATCGAGAACGTGGACGCGGTCGTGGAT
Trifolium fragiferum genome assembly, chromosome: 1.
OX940789.1:57240972-57240991
AGTTGTTTCACCTAAAGAAGAGCATGGTCG57240972AAGCAACCAAAGACGAGGTGGCGATCGAGAACGTGGACGCGGTCGTGGAT
Trifolium fragiferum genome assembly, chromosome: 2.
OX940790.1:18386158-18386177
AGTTGTTTCACCTAAAGAAGAGCATGGTCG18386158AAGCAACCAAAGACGAGGTGGCGATCGAGAACGTGGACGCGGTCGTGGAT
Trifolium fragiferum genome assembly, chromosome: 2.
OX940790.1:29526659-29526678
AGTCGTTTCATCTAAAGAAGAGCATGGTCG29526659AAGCAACCAAAGACGAGGTGGCGATCGAGAACGTGGACGCGGTCGTGGAT
Trifolium fragiferum genome assembly, chromosome: 2.
OX940790.1:36350532-36350551
AGTTGTTTCACCTAAAGAAGAGCATGATCG36350532AAGCAACCAAAGACGAGGTGGCGATCGAGAACGTGGACGCGGTCGTGGAT
Trifolium fragiferum genome assembly, chromosome: 2.
OX940790.1:53341839-53341858
AGTTGTTTCACCTAAAGAAGAGCATGGTCG53341839AAGCAACCAAAGACGAGGTGGCGATCGAGAACGTGGACGCGGTCGTGGAT
Trifolium fragiferum genome assembly, chromosome: 3.
OX940791.1:9839066-9839085
AGTTGTTTCACCTAAAGAAGAGCATGGTCA9839066AAGCAACCAAAGACGAGGTGGCGATCGAGAACGTGGACGCGGTCGTGGAT
Trifolium fragiferum genome assembly, chromosome: 3.
OX940791.1:9843531-9843550
AGTTGTTTCACCTAAAGAAGAGCATGGTCA9843531AAGCAACCAAAGACGAGGTGGCGATCGAGAACGTGGACGCGGTCGTGGAT
Trifolium fragiferum genome assembly, chromosome: 3.
OX940791.1:23772651-23772670
AGTTGTTTCACCTAAAGAAGAGCATGGTCG23772651AAGCAACCAAAGACGAGGTGGCGATCGAGAACGTGGACGCGGTCGTGGAT
Trifolium fragiferum genome assembly, chromosome: 3.
OX940791.1:35026900-35026919
AGTTGTTTCACCTAAAGAAGAGCATGGTCG35026900AAGCAACCAAAGACGAGGTGGCGATCGAGAACGTGGACGCGGTCGTGGAT
Trifolium fragiferum genome assembly, chromosome: 3.
OX940791.1:54177480-54177499
AGTTGTTTCACCTAAAGAAGAGCATGGTCG54177480AAGCAACCAAAGACGAGGTGGCGATCGAGAACGTGGACGCGGTCGTGGAT
Trifolium fragiferum genome assembly, chromosome: 4.
OX940792.1:3991800-3991819
AGTTGTTTCACCTAAAGAAGAGCATGGTCG3991800AAGCAACCAAAGACGAGGTGGCGATCGAGAACGTGGACGCGGTCGTGGAT
Trifolium fragiferum genome assembly, chromosome: 4.
OX940792.1:46373865-46373884
AGTTGTTTCACCTAAAGAAGAGCATGGTCG46373865AAGCAACCAAAGACGAGGTGGCGATCGAGAACGTGGACGCGGTCGTGGAT
Trifolium fragiferum genome assembly, chromosome: 5.
OX940793.1:43212023-43212042
AGTTGTTTCACCTAAAGAAGAGCATGGTCG43212023AAGCAACCAAAGACGAGGTGGCGATCGAGAACGTGGACGCGGTCGTGGAT
Trifolium fragiferum genome assembly, chromosome: 6.
OX940794.1:12597365-12597384
AGTTGTTTCACCTAAAGAAGAGCATGGTCG12597365AAGCAACCAAAGACGAGGTGGCGATCGAGAACGTGGACGCGGTCGTGGAT
Trifolium fragiferum genome assembly, chromosome: 7.
OX940795.1:4694861-4694880
AGTTGTTTCACCTAAAGAGGAGCATGGTCG4694861AAGCAACCAAAGACGAGGTGGTGATCGAGAACGTGGACACGGTCGCGGAT
Trifolium fragiferum genome assembly, chromosome: 8.
OX940796.1:14721013-14721032
AGTTGTTTCACCTAAAGAGGAGAATGGTCG14721013AAGCAACCAAAGACGAGGTGGCGATCGAGAACGTTGACGCGGCCGTGGAT
Orchestes rusci genome assembly, chromosome: 11.
OY293314.1:22513163-22513182
CTGTGGTTCTGTATGCAAACCGAAAAATTC22513163AAGCAACCAAAGACGAGGTGAGTGATGAAGCTTGTCTTTATACCCCTCCA
Trifolium pratense DNA, clone:RCG07873.
DE217413.1:186-205
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNC186CACCTCGTCTTTGGTTGCTTCGACCATGCTCTTCTCTAGGTGAATCGACT
Trifolium pratense DNA, clone:RCG14502.
DE222932.1:386-405
ATCCACGACCACGTCCACGTTCTCGAGCGC386CACCTCGTCTTTGGTTGCTTCGACCATGCTC
Trifolium repens isolate ACLI19 chromosome 02_Pall.
CP125839.1:38633891-38633910
ATCCACGGCCGCATCCACGTTCTCGATCAC38633891CACCTCGTCTTTGGTTGCTTCGACCATGCTCTTCTCTAGGTGAATCGACT
Trifolium repens isolate ACLI19 chromosome 05_0cc.
CP125844.1:30229048-30229067
ATCCACGACCGCGTCCACGTTCTCGATCAC30229048CACCTCGTCTTTGGTTGCTTCGACCATGCTCTTTTCTAGGTGAATCGACT
Trifolium repens isolate ACLI19 chromosome 05_Pall.
CP125845.1:13013192-13013211
ATCCACGACTGCGTCCACGTTCTCGATCGC13013192CACCTCGTCTTTGGTTGCTTCGACCATGCTCTTCTTTAGGTGAAACAACT
Trifolium subterraneum genome assembly, chromosome: 3.
OX637463.1:38214561-38214580
ATCCACGACCATGTCCACGTCCTCGATCGT38214561CACCTCGTCTTTGGTTGCTTAGACCATGCTCTTTTCTAGGTGAATCGACT
Trifolium subterraneum genome assembly, chromosome: 8.
OX637468.1:28338568-28338587
ATCCACAACCACGTCCACGTCCTCGATCGT28338568CACCTCGTCTTTGGTTGCTTCGACCATGCTCTTCTCTAGGTGAATCGACT
Trifolium dubium genome assembly, chromosome: 2.
OX638063.1:8933377-8933396
ATCCACGACCGCGTCCACGTTCTCGATATC8933377CACCTCGTCTTTGGTTGCTTCGACCATGTTGTTCTCTAGGTGAATCAACT
Trifolium dubium genome assembly, chromosome: 2.
OX638063.1:20439797-20439816
TTCCACGACCGCGTCCACGTTCTTGATTGC20439797CACCTCGTCTTTGGTTGCTTCGGCCATGTTGTTCTCTAGGTGAATCAACT
Trifolium dubium genome assembly, chromosome: 4.
OX638065.1:16073438-16073457
ATCCACGACCTCGTCCACGTTCTCGATTGC16073438CACCTCGTCTTTGGTTGCTTCGACCATGTTGTTCTCTAGGTGAATCGACT
Trifolium dubium genome assembly, chromosome: 4.
OX638065.1:28760673-28760692
TTCCACGACCGCGTCCACGTTCTTGATTGC28760673CACCTCGTCTTTGGTTGCTTCGGCCATGTTGTTCTCTAGGTGAATCAACT
Trifolium dubium genome assembly, chromosome: 4.
OX638065.1:34802505-34802524
ATCCACGACCGCGTCCACGTTCTTGATTGC34802505CACCTCGTCTTTGGTTGCTTCGGCCATGTTGTTCTTTAGGTGAATCAACT
Trifolium dubium genome assembly, chromosome: 4.
OX638065.1:38984416-38984435
TTCCACGACCGCGTCCACGTTCTTGATTGC38984416CACCTCGTCTTTGGTTGCTTCGGCCATGTTGTTCTCTAGGTGAATCAACT
Trifolium dubium genome assembly, chromosome: 7.
OX638068.1:12178755-12178774
TTCCACGACCGCATCCACGTTCTTGATTGC12178755CACCTCGTCTTTGGTTGCTTCGGCCATGTTGTTCTCTAGGTGAATCAACT
Trifolium dubium genome assembly, chromosome: 10.
OX638071.1:9693813-9693832
ATCCACGACCGCGTCCACGTTCTTGATTGC9693813CACCTCGTCTTTGGTTGCTTCGGCCATGTTGTTCTTTAGGTGAATCAACT
Trifolium dubium genome assembly, chromosome: 12.
OX638073.1:22091908-22091927
ATCCACGACCGCGTCCACGTTCTTGATTGC22091908CACCTCGTCTTTGGTTGCTTCGGCCATGTTGTTCTTTAGGTGAATCAACT
Trifolium dubium genome assembly, chromosome: 12.
OX638073.1:27102024-27102043
TTCCACGACCGCGTCCACGTTCTTGATTGC27102024CACCTCGTCTTTGGTTGCTTCGGCCATGTTGTTCTCTAGGTGAATCAACT
Acrobasis repandana genome assembly, chromosome: 3.
OY756217.1:2759007-2759026
TTCTTTCTTTTTTGGAAACACCTTCAAATC2759007CACCTCGTCTTTGGTTGCTTCGGAGATGGTGTGCGCTTCCCGACTTTGTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAGCAACCAAAGACGAGGTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAGCAACCAAAGACGAGGTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.118 | 0.109 | search_plus_done; http://172.18.8.135:50400/match?q=AAGCAACCAAAGACGAGGTG&k=0&no_gap=0&offset=0&limit=50
0.195 | 0.077 | search_minus_done; http://172.18.8.135:50400/match?q=CACCTCGTCTTTGGTTGCTT&k=0&no_gap=0&offset=0&limit=12
0.207 | 0.012 | cgi_end;

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